RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TSSK4Q6SA08 328 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 MARVELD2Q8N4S9 558 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 FBXO27Q8NI29 283 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 NAT6Q93015 286 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 C3orf30Q96M34 536 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 COG8Q96MW5 612 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 FUNDC2Q9BWH2 189 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 PBX4Q9BYU1 374 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 GNB4Q9HAV0 340 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 TEX10Q9NXF1 929 aaPredicted RBP10.47□□□□□ -0.73
LINC00346-201ENST00000538077 ZBTB42B2RXF5 422 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 LRRTM2O43300 516 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 ZNF749O43361 778 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 IGHG1P01857 330 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 AOAHP28039 575 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 NKX2-5P52952 324 aaPredicted RBP10.47□□□□□ -0.73
LINC00346-201ENST00000538077 FXNQ16595 210 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 DTWD1Q8N5C7 304 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 OR13C2Q8NGS9 318 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 SAP130Q9H0E3 1048 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 BTNL2Q9UIR0 455 aa10.47□□□□□ -0.73
LINC00346-201ENST00000538077 MDFIC2A0A1B0GVS7 189 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 TRAPPC2LH3BP13 241 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 BCAS1O75363 584 aaPredicted RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 HTR3AP46098 478 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 ZNF45Q02386 682 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 OR7E24Q6IFN5 339 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 VRK3Q8IV63 474 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 CCDC71LQ8N9Z2 235 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 OR5L1Q8NGL2 311 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 HHIPL1Q96JK4 782 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 MMP27Q9H306 513 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 MYH10P35580 1976 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 A0A1W2PQL4 384 aaPredicted RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 IFNA1P01562 189 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 HIST1H1TP22492 207 aaPredicted RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 CDK2P24941 298 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 CLDN10P78369 228 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 MRPL2Q5T653 305 aaKnown RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 OR52W1Q6IF63 320 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 BAIAP2L2Q6UXY1 529 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 C3P1Q6ZMU1 363 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 KIAA0907Q7Z7F0 614 aaPredicted RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 MARCH3Q86UD3 253 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 CBARPQ8N350 705 aaPredicted RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 THSD1Q9NS62 852 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 SACM1LQ9NTJ5 587 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 FAIMQ9NVQ4 179 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 TESQ9UGI8 421 aaKnown RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 WDR37Q9Y2I8 494 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 A0A087WUU8 490 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 DVL2O14641 736 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 SNNO75324 88 aaPredicted RBP10.46□□□□□ -0.73
LINC00346-201ENST00000538077 ATG12O94817 140 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 ZNF181Q2M3W8 571 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 GAREM2Q75VX8 874 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 CMTM1Q8IZ96 169 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 SCML4Q8N228 414 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 MSANTD3Q96H12 275 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 MICU1Q9BPX6 476 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 POTEKPQ9BYX7 375 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 DEFB127Q9H1M4 99 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 ABCG5Q9H222 651 aa10.46□□□□□ -0.73
LINC00346-201ENST00000538077 UBFD1O14562 309 aaKnown RBP10.46□□□□□ -0.74
LINC00346-201ENST00000538077 UGDHO60701 494 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 PTPN6P29350 595 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 CX3CR1P49238 355 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 FAM111BQ6SJ93 734 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 SLC35D2Q76EJ3 337 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 SIRT6Q8N6T7 355 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 OR13J1Q8NGT2 312 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 RSPRY1Q96DX4 576 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 WDR83Q9BRX9 315 aaKnown RBP10.46□□□□□ -0.74
LINC00346-201ENST00000538077 LRFN1Q9P244 771 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 DUSP13Q9UII6 198 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 SHISA7A6NL88 538 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 CREBL2O60519 120 aaPredicted RBP10.46□□□□□ -0.74
LINC00346-201ENST00000538077 ZIC2O95409 532 aaPredicted RBP10.46□□□□□ -0.74
LINC00346-201ENST00000538077 MT-ND4P03905 459 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 FCGR2AP12318 317 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 MYF5P13349 255 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 RAB38P57729 211 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 SBSNQ6UWP8 590 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 CLEC14AQ86T13 490 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 MRPL38Q96DV4 380 aaKnown RBP10.46□□□□□ -0.74
LINC00346-201ENST00000538077 OR5B12Q96R08 314 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 MMP28Q9H239 520 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 ACKR4Q9NPB9 350 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 SAGE1Q9NXZ1 904 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 SLC6A14Q9UN76 642 aa10.46□□□□□ -0.74
LINC00346-201ENST00000538077 DDAH2O95865 285 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF14P17017 642 aaPredicted RBP10.45□□□□□ -0.74
LINC00346-201ENST00000538077 TMBIM6P55061 237 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 CARD18P57730 90 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 PKDCCQ504Y2 493 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 KHDC1LQ5JSQ8 128 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 AKR1C8PQ5T2L2 129 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 COX15Q7KZN9 410 aa10.45□□□□□ -0.74
LINC00346-201ENST00000538077 SCCPDHQ8NBX0 429 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms