RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ACTA1P68133 377 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 POU4F2Q12837 409 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 FAPQ12884 760 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 BICRALQ6AI39 1079 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 SFXN4Q6P4A7 337 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 OR5T3Q8NGG3 340 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 GRPEL2Q8TAA5 225 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 SMPDL3BQ92485 455 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 ZNF426Q9BUY5 554 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 GON7Q9BXV9 100 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 HDHD2Q9H0R4 259 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 LMAN2LQ9H0V9 348 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 ZMIZ1Q9ULJ6 1067 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 RASD1Q9Y272 281 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 NOX1Q9Y5S8 564 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 DNAH14Q0VDD8 3507 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 ATG2AQ2TAZ0 1938 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 GXYLT2A0PJZ3 443 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 INMT-MINDY4F8WBC2 141 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 J3QLW9 94 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 AGRPO00253 132 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 HRO43593 1189 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 KLF8O95600 359 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 GUSBP08236 651 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 CT62P0C5K7 136 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 ZNF19P17023 458 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 NOS3P29474 1203 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 GZMKP49863 264 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 E2F1Q01094 437 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 PLAURQ03405 335 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 SLC3A1Q07837 685 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 CRMP1Q14194 572 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 TMEM184AQ6ZMB5 413 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 UBE2Q1Q7Z7E8 422 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 SLC44A3Q8N4M1 653 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 SAMD12Q8N8I0 201 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 C4orf36Q96KX1 117 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 TNFRSF13CQ96RJ3 184 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 TRIM2Q9C040 744 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 NIPAL2Q9H841 368 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 WBP1LQ9NX94 342 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 NPFFR2Q9Y5X5 522 aa14.81□□□□□ -0.04
CHMP1A-202ENST00000535997 IFNGP01579 166 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 SLC35E2P0CK97 266 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 ARSBP15848 533 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 NRG3P56975 720 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 RAB25P57735 213 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 OR12D2P58182 307 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 RRAS2P62070 204 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 YPEL5P62699 121 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 ZNF85Q03923 595 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 DMKNQ6E0U4 476 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 RNF44Q7L0R7 432 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 CA13Q8N1Q1 262 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 LSMEM1Q8N8F7 131 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 CNOT9Q92600 299 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 RFT1Q96AA3 541 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 FLRT3Q9NZU0 649 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 A0A1B0GWA3 101 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 FAM221BA6H8Z2 402 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 A6NL46 340 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 C1QBP02746 253 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 MRPL3P09001 348 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 SLC6A6P31641 620 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 LSSP48449 732 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 BTG1P62324 171 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 TNK1Q13470 666 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 ALG11Q2TAA5 492 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 Q5BKY6 102 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 FAM27D1Q5T7N8 215 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 HACD4Q5VWC8 232 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 FCRLBQ6BAA4 426 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 C7orf61Q8IZ16 206 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 SHISA5Q8N114 240 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 OR4M1Q8NGD0 313 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 ZFAND1Q8TCF1 268 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 GRHL3Q8TE85 626 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 ANKRD9Q96BM1 317 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 PGLYRP3Q96LB9 341 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 RPRD1BQ9NQG5 326 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 HRASLS2Q9NWW9 162 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 USP36Q9P275 1121 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 SERTAD3Q9UJW9 196 aa14.8□□□□□ -0.04
CHMP1A-202ENST00000535997 ANKRD34BA5PLL1 514 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 PPP1R3DO95685 299 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 CBX7O95931 251 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 EIF4EP06730 217 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 CLUP10909 449 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 PVRP15151 417 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 ILF3Q12906 894 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 EFR3AQ14156 821 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 GAS6Q14393 721 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 GPR176Q14439 515 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 ACSM3Q53FZ2 586 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 ARHGAP11AQ6P4F7 1023 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 ZAR1Q86SH2 424 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 PLCZ1Q86YW0 608 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 CSNK1A1LQ8N752 337 aa14.79□□□□□ -0.04
CHMP1A-202ENST00000535997 CYB561A3Q8NBI2 242 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms