RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CRHP06850 196 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 ETS2P15036 469 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 HOXB9P17482 250 aaPredicted RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 LSP1P33241 339 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 APOBEC1P41238 236 aaKnown RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 SUCLG1P53597 346 aaKnown RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 CARD18P57730 90 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 SESN3P58005 492 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 RBBP4Q09028 425 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 SLC25A53Q5H9E4 307 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 RPS26P11Q5JNZ5 115 aaPredicted RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 DLEU7Q6UYE1 221 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 SEM1Q6ZVN7 128 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 GRINAQ7Z429 371 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 ADGRE4PQ86SQ3 457 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 SNX32Q86XE0 403 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 MSRB3Q8IXL7 192 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 C11orf65Q8NCR3 313 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 BHLHE22Q8NFJ8 381 aaPredicted RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 OR10D3Q8NH80 312 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 NFKBIDQ8NI38 313 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 MAL2Q969L2 176 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 CPPED1Q9BRF8 314 aaPredicted RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 UCK2Q9BZX2 261 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 TMEM38AQ9H6F2 299 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 ACER3Q9NUN7 267 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 FOXD3Q9UJU5 478 aaPredicted RBP19.68■□□□□ 0.74
SSPN-204ENST00000535504 DSPPQ9NZW4 1301 aa19.68■□□□□ 0.74
SSPN-204ENST00000535504 TRBV5-3A0A0A0MS03 114 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 PRORSD1PA6NEY8 169 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 EEF1E1-BLOC1S5C9J1V9 151 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 EEF1E1O43324 174 aaKnown RBP19.67■□□□□ 0.74
SSPN-204ENST00000535504 TOXO94900 526 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 PGM3O95394 542 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 NUDT7P0C024 238 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 COL8A1P27658 744 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 CPA2P48052 419 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 ASCL1P50553 236 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 TOMM34Q15785 309 aaPredicted RBP19.67■□□□□ 0.74
SSPN-204ENST00000535504 TMEM176BQ3YBM2 270 aaPredicted RBP19.67■□□□□ 0.74
SSPN-204ENST00000535504 RNF220Q5VTB9 566 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 POMZP3Q6PJE2 187 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 HIPK4Q8NE63 616 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 POC1BQ8TC44 478 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 CPNE4Q96A23 557 aaPredicted RBP19.67■□□□□ 0.74
SSPN-204ENST00000535504 SPATA9Q9BWV2 254 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 PIGMQ9H3S5 423 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 KLHL28Q9NXS3 571 aa19.67■□□□□ 0.74
SSPN-204ENST00000535504 DNAJB12Q9NXW2 375 aaKnown RBP19.67■□□□□ 0.74
SSPN-204ENST00000535504 LOC100653049A0A140TA62 436 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 CLDN24A6NM45 220 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 ADAMDEC1O15204 470 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 KRT34O76011 436 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 OPN1LWP04000 364 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 TFPIP10646 304 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 PSMA4P25789 261 aaKnown RBP19.66■□□□□ 0.74
SSPN-204ENST00000535504 IDH2P48735 452 aaKnown RBP19.66■□□□□ 0.74
SSPN-204ENST00000535504 ZNF136P52737 540 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 MTPNP58546 118 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 INTS11Q5TA45 600 aaKnown RBP19.66■□□□□ 0.74
SSPN-204ENST00000535504 REP15Q6BDI9 236 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 ZNF836Q6ZNA1 936 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 PLEKHM3Q6ZWE6 761 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 GGNQ86UU5 652 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 RETREG3Q86VR2 466 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 VRK2Q86Y07 508 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 CNEP1R1Q8N9A8 125 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 RP9Q8TA86 221 aaKnown RBP19.66■□□□□ 0.74
SSPN-204ENST00000535504 CNOT9Q92600 299 aaKnown RBP19.66■□□□□ 0.74
SSPN-204ENST00000535504 ECSITQ9BQ95 431 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 EMC9Q9Y3B6 208 aa19.66■□□□□ 0.74
SSPN-204ENST00000535504 HEATR5AQ86XA9 2040 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 CDHR4A6H8M9 788 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 H0YC42 278 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 CXCL13O43927 109 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 DNAJA2O60884 412 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 SEC24CP53992 1094 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 TPD52P55327 224 aaPredicted RBP19.65■□□□□ 0.74
SSPN-204ENST00000535504 CTBP2P56545 445 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 NCALDP61601 193 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 GCNT2Q8N0V5 402 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 NAXEQ8NCW5 288 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 OR8J3Q8NGG0 315 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 FNDC9Q8TBE3 224 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 OSTF1Q92882 214 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 ZHX1-C8orf76Q96EF9 292 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 ZNF845Q96IR2 970 aaPredicted RBP19.65■□□□□ 0.74
SSPN-204ENST00000535504 DOCK7Q96N67 2140 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 GLRX2Q9NS18 164 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 RPS6KB2Q9UBS0 482 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 CHRNA9Q9UGM1 479 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 AP3M1Q9Y2T2 418 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 COL12A1Q99715 3063 aa19.65■□□□□ 0.74
SSPN-204ENST00000535504 KDM4EB2RXH2 506 aaPredicted RBP19.64■□□□□ 0.73
SSPN-204ENST00000535504 ETV2O00321 342 aaPredicted RBP19.64■□□□□ 0.73
SSPN-204ENST00000535504 FAAHO00519 579 aa19.64■□□□□ 0.73
SSPN-204ENST00000535504 TGM6O95932 706 aa19.64■□□□□ 0.73
SSPN-204ENST00000535504 GRNP28799 593 aaKnown RBP19.64■□□□□ 0.73
SSPN-204ENST00000535504 UQCRC1P31930 480 aa19.64■□□□□ 0.73
SSPN-204ENST00000535504 POLR2HP52434 150 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms