RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 CDKN1AP38936 164 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 MAP3K7CLP57077 242 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 BPIFB3P59826 476 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ARF5P84085 180 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 RBM39Q14498 530 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 TAF13Q15543 124 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 LRRC38Q5VT99 294 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 AGAP6Q5VW22 663 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 RBMS3Q6XE24 437 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 C5orf24Q7Z6I8 188 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 PRUNE1Q86TP1 453 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 SERPINA12Q8IW75 414 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ZNF619Q8N2I2 560 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 OR13C3Q8NGS6 347 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 OR4C3Q8NH37 302 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 HPSE2Q8WWQ2 592 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 TAF4BQ92750 862 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 FAM46BQ96A09 425 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 GAL3ST4Q96RP7 486 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 NPAS2Q99743 824 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 MRPL45Q9BRJ2 306 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 TTYH2Q9BSA4 534 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ALKBH7Q9BT30 221 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ANGPTL4Q9BY76 406 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 MTMR12Q9C0I1 747 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 THAP2Q9H0W7 228 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ZNF556Q9HAH1 456 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 SIX2Q9NPC8 291 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 FAM118AQ9NWS6 357 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 OR6C2Q9NZP2 312 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 FLRT3Q9NZU0 649 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 MOSPD1Q9UJG1 213 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ITM2BQ9Y287 266 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 MRPS2Q9Y399 296 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 ALG6Q9Y672 507 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 GABRR3A8MPY1 467 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 K7EIL1 84 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 CASKO14936 926 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 TOX3O15405 576 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 NEMFO60524 1076 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 CIDEAO60543 219 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 PDE5AO76074 875 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 ATP1B1P05026 303 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 RORAP35398 523 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 HERV-K104P61576 105 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 RPS24P62847 133 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 CETN1Q12798 172 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 PEX6Q13608 980 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 IFI44LQ53G44 452 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 DEFB121Q5J5C9 76 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 GPR157Q5UAW9 335 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 OR4C11Q6IEV9 310 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC39A4Q6P5W5 647 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 GDPD4Q6W3E5 623 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 C1orf186Q6ZWK4 172 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC16A9Q7RTY1 509 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 TRPT1Q86TN4 253 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 KIRREL3Q8IZU9 778 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 ARHGAP18Q8N392 663 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 STPG4Q8N801 248 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 OR7A2PQ8NGA2 310 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 OR56A4Q8NGH8 313 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 PSMA8Q8TAA3 256 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC37A2Q8TED4 501 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 PIK3IP1Q96FE7 263 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 APOOQ9BUR5 198 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 GSDMCQ9BYG8 508 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 B4GALT7Q9UBV7 327 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 EML6Q6ZMW3 1958 aa3.81□□□□□ -1.8
ECHDC1-223ENST00000534442 MYH11P35749 1972 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 GTPBP10A4D1E9 387 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 OR5H15A6NDH6 313 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 SNURFLB1AK76 121 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 HHLA1C9JL84 531 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 E5RGE8 158 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CACNB4O00305 520 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 P2RY10O00398 339 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 SCO2O43819 266 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 GLRA3O75311 464 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 REM1O75628 298 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CDK2AP2O75956 126 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 TM7SF2O76062 418 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 TGFAP01135 160 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 FAM200BP0CF97 657 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 NELFEP18615 380 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CCKARP32238 428 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CETN2P41208 172 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CCR8P51685 355 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 PLK1P53350 603 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 TNNC1P63316 161 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 ABRQ12979 859 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 PDE7AQ13946 482 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 PPA1Q15181 289 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 RBBP5Q15291 538 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 KLHL40Q2TBA0 621 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms