RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 HSF5Q4G112 596 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 CARD17Q5XLA6 110 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 TMEM184AQ6ZMB5 413 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 C19orf47Q8N9M1 422 aaKnown RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 ZMYND19Q96E35 227 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 GFOD1Q9NXC2 390 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 SRPK3Q9UPE1 567 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 TEX13CA0A0J9YWL9 993 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 A0A1B0GTL3 188 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 H7C417 338 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 PHYHO14832 338 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 TXNL1O43396 289 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 CTSLP07711 333 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 ZNF616Q08AN1 781 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 ERV3-1Q14264 604 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 ASTLQ6HA08 431 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 PDXPQ96GD0 296 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 LURAP1Q96LR2 239 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 QRSL1Q9H0R6 528 aaKnown RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 NLKQ9UBE8 527 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 DOCK5Q9H7D0 1870 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 AP1G1O43747 822 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 GMDSO60547 372 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 IDH3GP51553 393 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 KCNJ10P78508 379 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 CCINQ13939 588 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 SPIN3Q5JUX0 258 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 RAET1LQ5VY80 246 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 SNAPC3Q92966 411 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 ZNF436Q9C0F3 470 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-206ENST00000534320 NT5DC2Q9H857 520 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 ATG4BQ9Y4P1 393 aa16.09■□□□□ 0.17
PHRF1-206ENST00000534320 CIB4A0PJX0 185 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 OR6C65A6NJZ3 312 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 SLC34A2O95436 690 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 C1QAP02745 245 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 RAB5CP51148 216 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 LTB4RQ15722 352 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 OR2T35Q8NGX2 323 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.08■□□□□ 0.17
PHRF1-206ENST00000534320 EVA1AQ9H8M9 152 aa16.08■□□□□ 0.17
PHRF1-206ENST00000534320 GPN2Q9H9Y4 310 aaPredicted RBP16.08■□□□□ 0.17
PHRF1-206ENST00000534320 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 SYPP08247 313 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 KIAA1024LP59773 190 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 PGGHGQ32M88 737 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 TMEM69Q5SWH9 247 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 C1orf94Q6P1W5 598 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 TMEM41AQ96HV5 264 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 WDR77Q9BQA1 342 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 NUFIP1Q9UHK0 495 aaKnown RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 A0A1W2PQL4 384 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 IFNA5P01569 189 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 ADH7P40394 386 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 GAB1Q13480 694 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 MRPL2Q5T653 305 aaKnown RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 HES5Q5TA89 166 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 SLC48A1Q6P1K1 146 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 FAM111BQ6SJ93 734 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 ARL14Q8N4G2 192 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 CRB3Q9BUF7 120 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 LDAHQ9H6V9 325 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 DDX31Q9H8H2 851 aaKnown RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 CXorf51AA0A1B0GTR3 108 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 TSFMP43897 325 aaKnown RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 TSPAN31Q12999 210 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 PDE7AQ13946 482 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 GK2Q14410 553 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 ZNF674Q2M3X9 581 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 SLC35F2Q8IXU6 374 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 ZNF595Q8IYB9 648 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 OR1E3Q8WZA6 343 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 CPNE2Q96FN4 548 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-206ENST00000534320 PBX4Q9BYU1 374 aa16.08■□□□□ 0.16
PHRF1-206ENST00000534320 AQP9O43315 295 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 SLC5A2P31639 672 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 SLC22A10Q63ZE4 541 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 SDR9C7Q8NEX9 313 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 MUL1Q969V5 352 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 MYADMQ96S97 322 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 ADOQ96SZ5 270 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 KIR3DX1Q9H7L2 352 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 WASHC1A8K0Z3 465 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 UPK1BO75841 260 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 ZNF84P51523 738 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 TPMTP51580 245 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 EMP2P54851 167 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 PYCR3Q53H96 274 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 WASH2PQ6VEQ5 465 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 DNAJC22Q8N4W6 341 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 OR8S1Q8NH09 359 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 KIAA1143Q96AT1 154 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-206ENST00000534320 DDIT4LQ96D03 193 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 HRASLS5Q96KN8 279 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 NAA50Q9GZZ1 169 aaKnown RBP16.07■□□□□ 0.16
PHRF1-206ENST00000534320 THSD1Q9NS62 852 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 TESQ9UGI8 421 aaKnown RBP16.07■□□□□ 0.16
PHRF1-206ENST00000534320 FAM171A2A8MVW0 826 aa16.07■□□□□ 0.16
PHRF1-206ENST00000534320 B3GALNT1O75752 331 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms