RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 POU4F3Q15319 338 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 TMEM176BQ3YBM2 270 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 PPP4R4Q6NUP7 873 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 STAC2Q6ZMT1 411 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 EIF3MQ7L2H7 374 aaKnown RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ZNF619Q8N2I2 560 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 TMCO5AQ8N6Q1 288 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 GLB1L3Q8NCI6 653 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 RFWD2Q8NHY2 731 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 PIWIL2Q8TC59 973 aaKnown RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ZFP90Q8TF47 636 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ABHD3Q8WU67 409 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ROBO4Q8WZ75 1007 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ZNF75CPQ92670 426 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ALPK1Q96QP1 1244 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 OR52B2Q96RD2 323 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 PANX1Q96RD7 426 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 GP6Q9HCN6 339 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 SDR39U1Q9NRG7 319 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 SLC6A13Q9NSD5 602 aa12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-215ENST00000534307 ADAM11O75078 769 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 SLC22A3O75751 556 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 H6PDO95479 791 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 IL6P05231 212 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 CHRM4P08173 479 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 DNASE1P24855 282 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 LOXP28300 417 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 CCR4P51679 360 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 MVDP53602 400 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 SESN3P58005 492 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 TXNL4AP83876 142 aaKnown RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 CHRNEQ04844 493 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 GSTA3Q16772 222 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 TIGD2Q4W5G0 525 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 COX20Q5RI15 118 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 C3orf33Q6P1S2 294 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 ZNF550Q7Z398 422 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 TRIML2Q8N7C3 387 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 ANKFN1Q8N957 763 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 TRNT1Q96Q11 434 aaKnown RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 ZBTB18Q99592 522 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 MED18Q9BUE0 208 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 QRSL1Q9H0R6 528 aaKnown RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 SLC38A1Q9H2H9 487 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 TIGARQ9NQ88 270 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 ZNF226Q9NYT6 803 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 ZIM2Q9NZV7 527 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 C6orf203Q9P0P8 240 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-215ENST00000534307 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 EDARQ9UNE0 448 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 SLC35A3Q9Y2D2 325 aa12.53□□□□□ -0.4
SF3B2-215ENST00000534307 AGAP5A6NIR3 686 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 CLDN24A6NM45 220 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 CASKO14936 926 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 CYP7B1O75881 506 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 GSNP06396 782 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 THBDP07204 575 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 PABPC4LP0CB38 370 aaKnown RBP12.52□□□□□ -0.41
SF3B2-215ENST00000534307 CD53P19397 219 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 PGCP20142 388 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.41
SF3B2-215ENST00000534307 ENPP1P22413 925 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 KCNJ5P48544 419 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 RAC3P60763 192 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 MAPK11Q15759 364 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 SYPL1Q16563 259 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 GTF2IRD2BQ6EKJ0 949 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 PLEKHM3Q6ZWE6 761 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 GTF2IRD2Q86UP8 949 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 ATP6V1C2Q8NEY4 427 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 C7orf26Q96N11 449 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 CCDC106Q9BWC9 280 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
SF3B2-215ENST00000534307 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 RAI1Q7Z5J4 1906 aaPredicted RBP12.52□□□□□ -0.41
SF3B2-215ENST00000534307 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
SF3B2-215ENST00000534307 MXRA5Q9NR99 2828 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 A0A1W2PNR3 127 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 RFXANKO14593 260 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 SLC7A1P30825 629 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 MAGEA8P43361 318 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 MRPL19P49406 292 aaKnown RBP12.51□□□□□ -0.41
SF3B2-215ENST00000534307 PPP2R2AP63151 447 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 KCNJ10P78508 379 aa12.51□□□□□ -0.41
SF3B2-215ENST00000534307 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms