RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	LYPD6	Q86Y78	171 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SIAH3	Q8IW03	269 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ACBD7	Q8N6N7	88 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM71C	Q8NEG0	241 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR13C5	Q8NGS8	318 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CLIP3	Q96DZ5	547 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	HS6ST2	Q96MM7	605 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ASB16	Q96NS5	453 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	C7orf50	Q9BRJ6	194 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ORAI3	Q9BRQ5	295 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	PRRG3	Q9BZD7	231 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ABCG5	Q9H222	651 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	EXOSC3	Q9NQT5	275 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DIABLO	Q9NR28	239 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CTPS2	Q9NRF8	586 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	LYAR	Q9NX58	379 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TOR4A	Q9NXH8	423 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CALML5	Q9NZT1	146 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MALT1	Q9UDY8	824 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC22A7	Q9Y694	548 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SPEG	Q15772	3267 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MFSD2B	A6NFX1	497 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	IGLON5	A6NGN9	336 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TUBAL3	A6NHL2	446 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SNTN	A6NMZ2	147 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	HMGN1	P05114	100 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SYP	P08247	313 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	HOXD4	P09016	255 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	PPP2R1B	P30154	601 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	IGFALS	P35858	605 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	IFNGR2	P38484	337 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RECQL	P46063	649 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	GCGR	P47871	477 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ARPC4	P59998	168 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR1Q1	Q15612	314 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MZT2A	Q6P582	158 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF613	Q6PF04	617 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RPTN	Q6XPR3	784 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DGAT2L6	Q6ZPD8	337 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897		Q6ZTK2	550 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM122B	Q7Z309	247 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	FGD2	Q7Z6J4	655 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SLITRK4	Q8IW52	837 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SPIC	Q8N5J4	248 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR8D1	Q8WZ84	308 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	GAL3ST3	Q96A11	431 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	WDR89	Q96FK6	387 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TOE1	Q96GM8	510 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	LMF2	Q9BU23	707 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CCDC86	Q9H6F5	360 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TBC1D17	Q9HA65	648 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DUSP22	Q9NRW4	184 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	EVA1B	Q9NVM1	165 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ING3	Q9NXR8	418 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DNAJB12	Q9NXW2	375 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TNFRSF10D	Q9UBN6	386 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SPATA2	Q9UM82	520 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CAMK2A	Q9UQM7	478 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897		A0A0G2JN53	185 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TRBV5-5	A0A0J9YX44	114 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TRAPPC13	A5PLN9	417 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TGFBR3L	H3BV60	316 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	GMDS	O60547	372 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CTSV	O60911	334 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	KCNJ13	O60928	360 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CH25H	O95992	272 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RPN2	P04844	631 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CT62	P0C5K7	136 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CSF2RA	P15509	400 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	F8A1	P23610	371 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	BUD31	P41223	144 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RBM34	P42696	430 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CAPZA2	P47755	286 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR12D2	P58182	307 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SRSF4	Q08170	494 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TGM3	Q08188	693 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	BAMBI	Q13145	260 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM78A	Q5JUQ0	283 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	BCL2L15	Q5TBC7	163 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM166A	Q6J272	317 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NLRC3	Q7RTR2	1065 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	LRRTM1	Q86UE6	522 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ADGRG3	Q86Y34	549 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NRROS	Q86YC3	692 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF619	Q8N2I2	560 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF527	Q8NB42	609 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NPEPL1	Q8NDH3	523 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR2T4	Q8NH00	348 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR14A16	Q8NHC5	309 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MCHR1	Q99705	422 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	EVA1A	Q9H8M9	152 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	POLE3	Q9NRF9	147 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DDX28	Q9NUL7	540 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	GLTP	Q9NZD2	209 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ABRACL	Q9P1F3	81 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	COPS3	Q9UNS2	423 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CA5B	Q9Y2D0	317 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms