RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 PRAMEF1O95521 474 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 PTHP01270 115 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 TACR1P25103 407 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 TNFSF8P32971 234 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 RING1Q06587 406 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 SLC3A1Q07837 685 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 GAMTQ14353 236 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 NTRK2Q16620 822 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 HES5Q5TA89 166 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 LYPLAL1Q5VWZ2 237 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 TYW3Q6IPR3 259 aaKnown RBP5.05□□□□□ -1.6
CKAP5-212ENST00000533413 LIPIQ6XZB0 460 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 TMEM150AQ86TG1 271 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 VRK2Q86Y07 508 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 DMRTC2Q8IXT2 367 aaPredicted RBP5.05□□□□□ -1.6
CKAP5-212ENST00000533413 CLDN19Q8N6F1 224 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 WDR36Q8NI36 951 aaKnown RBP5.05□□□□□ -1.6
CKAP5-212ENST00000533413 GPBAR1Q8TDU6 330 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 WFIKKN2Q8TEU8 576 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 TSEN15Q8WW01 171 aaKnown RBP5.05□□□□□ -1.6
CKAP5-212ENST00000533413 TCEAL4Q96EI5 215 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 MYEOVQ96EZ4 313 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 C1orf159Q96HA4 380 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 FOPNLQ96NB1 174 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 DCLRE1CQ96SD1 692 aaKnown RBP5.05□□□□□ -1.6
CKAP5-212ENST00000533413 MGLLQ99685 303 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 UCK2Q9BZX2 261 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 HEXA-AS1Q9H8Q6 139 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 RAD18Q9NS91 495 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 IL17CQ9P0M4 197 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 EPHA6Q9UF33 1036 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 MUTYHQ9UIF7 546 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 CA14Q9ULX7 337 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 SLC5A6Q9Y289 635 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 ZNF451Q9Y4E5 1061 aa5.05□□□□□ -1.6
CKAP5-212ENST00000533413 MEIOCA2RUB1 952 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 SSX4O60224 188 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 GMDSO60547 372 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 B3GALT4O96024 378 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 GBAP04062 536 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 OR4E1P0C645 316 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 GPX2P18283 190 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 CR2P20023 1033 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PPIBP23284 216 aaKnown RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 RPS3P23396 243 aaKnown RBP eCLIP5.04□□□□□ -1.66e-7■■□□□ 13.1
CKAP5-212ENST00000533413 MC3RP41968 323 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 RORCP51449 518 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 MFAP4P55083 255 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 RPS24P62847 133 aaKnown RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 TAB1Q15750 504 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 ZNF77Q15935 545 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PLEKHS1Q5SXH7 462 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PRAMEF8Q5VWM4 474 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 NOXRED1Q6NXP6 359 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 LRRC70Q7Z2Q7 622 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 RTN4RL2Q86UN3 420 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 LGI4Q8N135 537 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 C9orf62Q8N4C0 152 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 SLC5A8Q8N695 610 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 OR5T2Q8NGG2 359 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 UBTD2Q8WUN7 234 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 ZDHHC16Q969W1 377 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 AP2M1Q96CW1 435 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 SNX22Q96L94 193 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 ZNF48Q96MX3 618 aaPredicted RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 DIRC2Q96SL1 478 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 C12orf57Q99622 126 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 DOHHQ9BU89 302 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PAPOLGQ9BWT3 736 aaKnown RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 BOCQ9BWV1 1114 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 ASPNQ9BXN1 380 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 EBPLQ9BY08 206 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 REG4Q9BYZ8 158 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 CPEB1Q9BZB8 566 aaKnown RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 SLC22A4Q9H015 551 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 ZCCHC4Q9H5U6 513 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 TPT1P8Q9HAU6 139 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 C3orf14Q9HBI5 128 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 RANGRFQ9HD47 186 aaPredicted RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PISDQ9UG56 409 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 LSM7Q9UK45 103 aaKnown RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 ACSL5Q9ULC5 683 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 FZD4Q9ULV1 537 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 COL4A3Q01955 1670 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 NYNRINQ9P2P1 1898 aaKnown RBP5.04□□□□□ -1.6
CKAP5-212ENST00000533413 A0A087WZY1 265 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 A0A0B4J293 547 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PRAMEF27A3QJZ7 478 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PRAMEF25A6NGN4 478 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 HEPACAM2A8MVW5 462 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PRAMEF26H0Y7S4 382 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 GFRA2O00451 464 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 MPZL2O60487 215 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 DPM1O60762 260 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 PRAMEF4O60810 478 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 NFATC1O95644 943 aa5.04□□□□□ -1.6
CKAP5-212ENST00000533413 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms