RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	RNF128	Q8TEB7	428 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	DNMT3B	Q9UBC3	853 aa	Known RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791		H3BMQ9	156 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	GALR3	O60755	368 aa	Predicted RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	GJB3	O75712	270 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	ZNF44	P15621	663 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	ITGB8	P26012	769 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	SMAD2	Q15796	467 aa	Known RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	SLC22A6	Q4U2R8	563 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	FAM78A	Q5JUQ0	283 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	IL20RB	Q6UXL0	311 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR5K2	Q8NHB8	316 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	FNDC9	Q8TBE3	224 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	NT5C3B	Q969T7	300 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	TCTN2	Q96GX1	697 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	COG8	Q96MW5	612 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	BCAT2	O15382	392 aa	Predicted RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	PTPN6	P29350	595 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR1D4	P47884	311 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	CHRNE	Q04844	493 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	PRDX1	Q06830	199 aa	Known RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	SYPL1	Q16563	259 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	GPR139	Q6DWJ6	353 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	IL1F10	Q8WWZ1	152 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	ULBP2	Q9BZM5	246 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	ENPP5	Q9UJA9	477 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791		V9GY05	133 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	C2orf72	A6NCS6	295 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	ARPC1B	O15143	372 aa	Known RBP	18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	CDK1	P06493	297 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	FAM69A	Q5T7M9	428 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	NIPAL3	Q6P499	406 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	CBLL1	Q75N03	491 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MKX	Q8IYA7	352 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MMP21	Q8N119	569 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	DEDD2	Q8WXF8	326 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	THAP7	Q9BT49	309 aa	Predicted RBP	18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	OBP2B	Q9NPH6	170 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	TCHH	Q07283	1943 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	TMEM269	A0A1B0GVZ9	245 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	SPDEF	O95238	335 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	ATP1B3	P54709	279 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	VASN	Q6EMK4	673 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	COMMD7	Q86VX2	200 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	RNF175	Q8N4F7	328 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MYLIP	Q8WY64	445 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	ATOH8	Q96SQ7	321 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	PRRT1	Q99946	306 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	NICN1	Q9BSH3	213 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	INPP5E	Q9NRR6	644 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	FAM53C	Q9NYF3	392 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	GPR160	Q9UJ42	338 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR6C6	A6NF89	314 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791		B4DXG7	233 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791		H0YGG7	62 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	TP53	P04637	393 aa	Predicted RBP	18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	CD46	P15529	392 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MAOA	P21397	527 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	EFNA3	P52797	238 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MEF2D	Q14814	521 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MOB3C	Q70IA8	216 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	TMIGD2	Q96BF3	282 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	CPNE5	Q9HCH3	593 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	DYNLRB1	Q9NP97	96 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	KDM4E	B2RXH2	506 aa	Predicted RBP	18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	PRAF2	O60831	178 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	ITGAM	P11215	1152 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	NKX2-5	P52952	324 aa	Predicted RBP	18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	KCNJ10	P78508	379 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	MGAT3	Q09327	533 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	GPR18	Q14330	331 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	GK2	Q14410	553 aa	Predicted RBP	18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	TMEFF1	Q8IYR6	380 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	STK35	Q8TDR2	534 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	ULBP3	Q9BZM4	244 aa		18.29	■□□□□ 0.52
FGFR1-238	ENST00000532791	ADAM12	O43184	909 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	AIFM1	O95831	613 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	RBPJ	Q06330	500 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	SF3A2	Q15428	464 aa	Known RBP	18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	HYAL4	Q2M3T9	481 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	ELMOD3	Q96FG2	381 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	MMP28	Q9H239	520 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	HCST	Q9UBK5	93 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	TES	Q9UGI8	421 aa	Known RBP	18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	ARFGEF2	Q9Y6D5	1785 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	UPK1B	O75841	260 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	ABO	P16442	354 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	OPRL1	P41146	370 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	AGAP7P	Q5VUJ5	663 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	AGAP6	Q5VW22	663 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	B3GNT9	Q6UX72	402 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	GIMAP5	Q96F15	307 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	AGAP4	Q96P64	663 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	SLC6A20	Q9NP91	592 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	ACSS1	Q9NUB1	689 aa	Predicted RBP	18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	EMCN	Q9ULC0	261 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	SCRG1	O75711	98 aa		18.28	■□□□□ 0.52
FGFR1-238	ENST00000532791	SERPINA2	P20848	420 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms