RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 MAP3K8P41279 467 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 QARSP47897 775 aaKnown RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 DUSP3P51452 185 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 SUCLG1P53597 346 aaKnown RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 LMO4P61968 165 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 CXCL6P80162 114 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 ZFP36L1Q07352 338 aaKnown RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 IDI1Q13907 227 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 VGLL4Q14135 290 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 GRB7Q14451 532 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 SLC15A2Q16348 729 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 GLYR1Q49A26 553 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 SLC22A6Q4U2R8 563 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 C1orf220Q5T0J3 134 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 OR2A2Q6IF42 318 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 TRPM8Q7Z2W7 1104 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 FAM228AQ86W67 206 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 CDR2LQ86X02 465 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 NBPF5PQ86XG9 351 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 MCOLN2Q8IZK6 566 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 ALLCQ8N6M5 410 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 Q8N9G6 341 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 OR1L4Q8NGR5 311 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 GTSF1Q8WW33 167 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 IL1F10Q8WWZ1 152 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 RASL10AQ92737 203 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 C10orf35Q96D05 121 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 TPD52L3Q96J77 140 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 C12orf42Q96LP6 360 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 C1orf147Q96MC9 270 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 RPRD1AQ96P16 312 aaPredicted RBP2.28□□□□□ -2.04
CD44-234ENST00000531873 TBX15Q96SF7 602 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 SLC35A5Q9BS91 424 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 TUBGCP2Q9BSJ2 902 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 TRIM62Q9BVG3 475 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 GLT8D2Q9H1C3 349 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 AZI2Q9H6S1 392 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 YY1AP1Q9H869 796 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 POPDC2Q9HBU9 364 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 SENP1Q9P0U3 644 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 SEC14L3Q9UDX4 400 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 ERVW-1Q9UQF0 538 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 IFT52Q9Y366 437 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 PRSS21Q9Y6M0 314 aa2.28□□□□□ -2.04
CD44-234ENST00000531873 CTAGE15A4D2H0 777 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 GOLGA8OA6NCC3 632 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 FAM47DPA6NHR8 397 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 GOLGA8NF8WBI6 632 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ERLIN1O75477 346 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 DUSP14O95147 198 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 LYPD3O95274 346 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 GNA14O95837 355 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 PGK1P00558 417 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ZNF853P0CG23 659 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ETS2P15036 469 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 GCFC2P16383 781 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 POLR2EP19388 210 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 GCAP28676 217 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 NF2P35240 595 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 RPL13AP40429 203 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 PRMT2P55345 433 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 MRPS11P82912 194 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 GBE1Q04446 702 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 LPAL2Q16609 132 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 QRICH1Q2TAL8 776 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 CXCL17Q6UXB2 119 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 VITQ6UXI7 678 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 CTAGE6Q86UF2 777 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 SERINC5Q86VE9 423 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 TRIM69Q86WT6 500 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 SLC35F2Q8IXU6 374 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 FAM110BQ8TC76 370 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 PAQR8Q8TEZ7 354 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 TFB1MQ8WVM0 346 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 TOMM40LQ969M1 308 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 TIMD4Q96H15 378 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 IL4I1Q96RQ9 567 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ATOH8Q96SQ7 321 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 PSMB7Q99436 277 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 COPS8Q99627 209 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 CHRDL1Q9BU40 450 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 TSSK1BQ9BXA7 367 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 GPR61Q9BZJ8 451 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ELOVL4Q9GZR5 314 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ZFP14Q9HCL3 533 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 POLE4Q9NR33 117 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 ETNK2Q9NVF9 386 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 PISDQ9UG56 409 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 WARS2Q9UGM6 360 aaKnown RBP2.27□□□□□ -2.05
CD44-234ENST00000531873 SUN2Q9UH99 717 aa2.27□□□□□ -2.05
CD44-234ENST00000531873 IGKV3D-15A0A087WSY6 115 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 A0A087WWV3 80 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 A0A1B0GU03 582 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 A0A1B0GWB2 263 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 A0A1W2PPV9 198 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 PCP4L1A6NKN8 68 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 B4DXG7 233 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 TRDCB7Z8K6 153 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 KIF2AO00139 706 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 SULT2B1O00204 365 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms