RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SFRP5Q5T4F7 317 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 C3orf33Q6P1S2 294 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 ANKRD46Q86W74 232 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 GOLGA6L1Q8N7Z2 621 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 MGARPQ8TDB4 240 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 XAGE5Q8WWM1 108 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 TMEM234Q8WY98 164 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 ST8SIA1Q92185 356 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF524Q96C55 264 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 GSX2Q9BZM3 304 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 NGBQ9NPG2 151 aa19.82■□□□□ 0.76
TRAPPC4-210ENST00000531290 IGHV3-15A0A0B4J1V0 119 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 H7C1Q1 480 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 ETV2O00321 342 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 GCM2O75603 506 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 PLAUP00749 431 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 UBTFL6P0CB48 400 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 OR12D1P0DN82 309 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 PGCP20142 388 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 SLC18A1P54219 525 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 SKP2Q13309 424 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 P2RY6Q15077 328 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 MIPOL1Q8TD10 442 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 HSD17B8Q92506 261 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 OR5B2Q96R09 309 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 USB1Q9BQ65 265 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 C20orf27Q9GZN8 174 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF350Q9GZX5 532 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 QRSL1Q9H0R6 528 aaKnown RBP19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 CXorf56Q9H5V9 222 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 KCNE5Q9UJ90 142 aa19.81■□□□□ 0.76
TRAPPC4-210ENST00000531290 PCNX3Q9H6A9 2034 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 HS3ST1O14792 307 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 ADAP00813 363 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 LBPP18428 481 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 PTH2RP49190 550 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 SESN3P58005 492 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 RASGEF1BQ0VAM2 473 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 MERTKQ12866 999 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 TSC22D1Q15714 1073 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 ATG16L1Q676U5 607 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 HEPHL1Q6MZM0 1159 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 OLIG3Q7RTU3 272 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF611Q8N823 705 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 KISS1RQ969F8 398 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 TESCQ96BS2 214 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 COX4I2Q96KJ9 171 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 TMEM204Q9BSN7 226 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 NUF2Q9BZD4 464 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 BCO1Q9HAY6 547 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 WDR45Q9Y484 360 aa19.8■□□□□ 0.76
TRAPPC4-210ENST00000531290 DNAJA2O60884 412 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 TMCC2O75069 709 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 HEXAP06865 529 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 CHI3L1P36222 383 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 CLNS1AP54105 237 aaKnown RBP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 ITGADQ13349 1161 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 CAPRIN1Q14444 709 aaKnown RBP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 TNFAIP8L2Q6P589 184 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 HDXQ7Z353 690 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 LRRC34Q8IZ02 419 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 CIARTQ8N365 385 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 OIT3Q8WWZ8 545 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 AKAP1Q92667 903 aaKnown RBP eCLIP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 RAB8BQ92930 207 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 ROPN1LQ96C74 230 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 TLCD1Q96CP7 247 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 SORT1Q99523 831 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 ESRP2Q9H6T0 727 aaKnown RBP19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 POLE3Q9NRF9 147 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 ACER3Q9NUN7 267 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 SLC35A3Q9Y2D2 325 aa19.79■□□□□ 0.76
TRAPPC4-210ENST00000531290 CENPVL1A0A0U1RR11 272 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 C9JVG2 144 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 SMAD7O15105 426 aaKnown RBP19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 SCN2BO60939 215 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 H6PDO95479 791 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 LY6G6DO95868 133 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 GUSBP08236 651 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 S100A3P33764 101 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 CSNK2A1P68400 391 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 PHC1P78364 1004 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 TAB1Q15750 504 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 MAPK14Q16539 360 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 DPY19L1Q2PZI1 675 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 SPANXN4Q5MJ08 99 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 AGBL2Q5U5Z8 902 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF619Q8N2I2 560 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF563Q8TA94 476 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF775Q96BV0 537 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 PSD2Q9BQI7 771 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 MARCOQ9UEW3 520 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 RNF115Q9Y4L5 304 aa19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 SPIN1Q9Y657 262 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC4-210ENST00000531290 TRIM64A6NGJ6 449 aa19.77■□□□□ 0.76
TRAPPC4-210ENST00000531290 TRIM64BA6NI03 449 aa19.77■□□□□ 0.76
TRAPPC4-210ENST00000531290 ZNF814B7Z6K7 855 aa19.77■□□□□ 0.76
TRAPPC4-210ENST00000531290 SULT2B1O00204 365 aa19.77■□□□□ 0.76
TRAPPC4-210ENST00000531290 SMAD9O15198 467 aaKnown RBP19.77■□□□□ 0.76
TRAPPC4-210ENST00000531290 CLOCKO15516 846 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms