RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ESRRBO95718 433 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 ANGPTL1O95841 491 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 CD8AP01732 235 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 LYNP07948 512 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 FGF4P08620 206 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 UQCRBP14927 111 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PSMB1P20618 241 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 EDNRAP25101 427 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PEX2P28328 305 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 TIA1P31483 386 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 MAP3K8P41279 467 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 RPS3AP61247 264 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PRR5P85299 388 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 TRAP1Q12931 704 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 CSTF3Q12996 717 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 MED21Q13503 144 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 TRIP10Q15642 601 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 SGCBQ16585 318 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 CYP27C1Q4G0S4 372 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 UNC50Q53HI1 259 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 NCMAPQ5T1S8 102 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 KANK2Q63ZY3 851 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 REP15Q6BDI9 236 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PPP4R4Q6NUP7 873 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 C8orf82Q6P1X6 216 aaPredicted RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 ZAR1Q86SH2 424 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PIP4P2Q8N4L2 257 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 ABHD3Q8WU67 409 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PIK3R3Q92569 461 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 GFM2Q969S9 779 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 ROPN1LQ96C74 230 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 DUS3LQ96G46 650 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 LMF2Q9BU23 707 aaKnown RBP8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 C19orf24Q9BVV8 132 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 C12orf49Q9H741 205 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 TMEM185BQ9H7F4 350 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 PTGES2Q9H7Z7 377 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 YAE1D1Q9NRH1 226 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 TMEM45AQ9NWC5 275 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 FBXO34Q9NWN3 711 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 RIMS3Q9UJD0 308 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 DTNAQ9Y4J8 743 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 RNF115Q9Y4L5 304 aa8.18□□□□□ -1.1
CHMP4A-205ENST00000531158 IGHV4-30-2A0A087WSY4 118 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 GNG14A0A1W2PPG7 69 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 DPPA5A6NC42 116 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 DPRXA6NFQ7 191 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 H0YJX3 145 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ACOT8O14734 319 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 TNFSF11O14788 317 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 CLOCKO15516 846 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 TLX2O43763 284 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 HSD3B1P14060 373 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ZNF17P17021 662 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 DDCP20711 480 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 PTNP21246 168 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 HSD3B2P26439 372 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 MPIP34949 423 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 RFX3P48380 749 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 NCBP2P52298 156 aaKnown RBP eCLIP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 FOXA1P55317 472 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 SH3BGRP55822 239 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 PSME3P61289 254 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 MRPS22P82650 360 aaKnown RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 CLCQ05315 142 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 BSPH1Q075Z2 132 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 CEACAM7Q14002 265 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ETFDHQ16134 617 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 PLPPR5Q32ZL2 321 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ZNF672Q499Z4 452 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 SAMD4BQ5PRF9 694 aaKnown RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ALKBH2Q6NS38 261 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 FIGNL1Q6PIW4 674 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 TFAP2EQ6VUC0 442 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 BEND4Q6ZU67 534 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 NUFIP2Q7Z417 695 aaKnown RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ZNF619Q8N2I2 560 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 GTPBP8Q8N3Z3 284 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ICA1LQ8NDH6 482 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 OR4C3Q8NH37 302 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 TSPEARQ8WU66 669 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 SMAP2Q8WU79 429 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ROBO4Q8WZ75 1007 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 HOXB13Q92826 284 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 FBXW5Q969U6 566 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ELP4Q96EB1 424 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 DTNBP1Q96EV8 351 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ZBED6CLQ96FA7 236 aaPredicted RBP8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 RNF145Q96MT1 663 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 AMDHD1Q96NU7 426 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 ZNF382Q96SR6 550 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 CDRT15Q96T59 188 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 SRXN1Q9BYN0 137 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 PLA2G12AQ9BZM1 189 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 TRIM2Q9C040 744 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 OR10A4Q9H209 315 aa8.17□□□□□ -1.1
CHMP4A-205ENST00000531158 MUC13Q9H3R2 512 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms