RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 HSD17B8Q92506 261 aa18.58■□□□□ 0.56
SMPD1-204ENST00000530395 ZNF350Q9GZX5 532 aa18.58■□□□□ 0.56
SMPD1-204ENST00000530395 OR51I1Q9H343 314 aa18.58■□□□□ 0.56
SMPD1-204ENST00000530395 ESRP2Q9H6T0 727 aaKnown RBP18.58■□□□□ 0.56
SMPD1-204ENST00000530395 BCO1Q9HAY6 547 aa18.58■□□□□ 0.56
SMPD1-204ENST00000530395 SSU72Q9NP77 194 aaKnown RBP18.58■□□□□ 0.56
SMPD1-204ENST00000530395 MKLN1Q9UL63 735 aa18.58■□□□□ 0.56
SMPD1-204ENST00000530395 PRSS51A0A1B0GVH4 220 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 ESPNB1AK53 854 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 FCMRO60667 390 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 UGT2B17O75795 530 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 PLAUP00749 431 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 ADAP00813 363 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 PAX1P15863 534 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 PGCP20142 388 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 UQCRC2P22695 453 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 RPL14P50914 215 aaKnown RBP18.57■□□□□ 0.56
SMPD1-204ENST00000530395 IGFBPL1Q8WX77 278 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 AKAP1Q92667 903 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMPD1-204ENST00000530395 OR5B2Q96R09 309 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 PSD2Q9BQI7 771 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 POLE3Q9NRF9 147 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 SLC35A3Q9Y2D2 325 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 RNF115Q9Y4L5 304 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 USF3Q68DE3 2245 aa18.57■□□□□ 0.56
SMPD1-204ENST00000530395 TRIM64A6NGJ6 449 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 TRIM64BA6NI03 449 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 SMAD7O15105 426 aaKnown RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 KIAA0513O60268 411 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 DNAJA2O60884 412 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 CPSF4O95639 269 aaKnown RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 LY6G6DO95868 133 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 CD3EP07766 207 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 UBTFL6P0CB48 400 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 SLC1A6P48664 564 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 KHKP50053 298 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 CLNS1AP54105 237 aaKnown RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 RASGEF1BQ0VAM2 473 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 MERTKQ12866 999 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 ITGADQ13349 1161 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 CAPRIN1Q14444 709 aaKnown RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 TSC22D1Q15714 1073 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 TAB1Q15750 504 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 DPY19L1Q2PZI1 675 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 HEPHL1Q6MZM0 1159 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 ANKRD46Q86W74 232 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 LRRC34Q8IZ02 419 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 CIARTQ8N365 385 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 SLC25A43Q8WUT9 341 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 TESCQ96BS2 214 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 ZNF524Q96C55 264 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 POTEKPQ9BYX7 375 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 QRSL1Q9H0R6 528 aaKnown RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 KCNE5Q9UJ90 142 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 WDR45Q9Y484 360 aa18.56■□□□□ 0.56
SMPD1-204ENST00000530395 SPIN1Q9Y657 262 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-204ENST00000530395 CENPVL1A0A0U1RR11 272 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 SMAD9O15198 467 aaKnown RBP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 CYTIPO60759 359 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 H6PDO95479 791 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 GUSBP08236 651 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 OR12D1P0DN82 309 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 CHI3L1P36222 383 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 OR3A2P47893 321 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 CASP9P55211 416 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 SESN3P58005 492 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 CSNK2A1P68400 391 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 HPCAP84074 193 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 TNFAIP8L2Q6P589 184 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 Q6ZT83 130 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 XAGE5Q8WWM1 108 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 CENPHQ9H3R5 247 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 ACER3Q9NUN7 267 aa18.55■□□□□ 0.56
SMPD1-204ENST00000530395 ZNF701Q9NV72 531 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 V9GYY5 206 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-204ENST00000530395 FN1P02751 2386 aaKnown RBP18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ZNF724A8MTY0 619 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 CLOCKO15516 846 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 CNOT4O95628 575 aaKnown RBP18.54■□□□□ 0.56
SMPD1-204ENST00000530395 LBPP18428 481 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ATP5J2P56134 94 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 RPS4XP62701 263 aaKnown RBP18.54■□□□□ 0.56
SMPD1-204ENST00000530395 SYT14P1Q58G82 188 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 NCMAPQ5T1S8 102 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 TYW3Q6IPR3 259 aaKnown RBP18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ADAM5Q6NVV9 412 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 BHLHA15Q7RTS1 189 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-204ENST00000530395 OLIG3Q7RTU3 272 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ZNF619Q8N2I2 560 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ZNF563Q8TA94 476 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 RAB3IL1Q8TBN0 382 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 RAB8BQ92930 207 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 FBXW5Q969U6 566 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ROPN1LQ96C74 230 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 SORT1Q99523 831 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 NUF2Q9BZD4 464 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 EMC3Q9P0I2 261 aa18.54■□□□□ 0.56
SMPD1-204ENST00000530395 ING1Q9UK53 422 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-204ENST00000530395 LAMP3Q9UQV4 416 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms