RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CYP7B1O75881 506 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 POU2F1P14859 743 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 SESN3P58005 492 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 RNPS1Q15287 305 aaKnown RBP29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 SYPL1Q16563 259 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 TIGD2Q4W5G0 525 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 ANKFN1Q8N957 763 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 ZNF610Q8N9Z0 462 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 OR9I1Q8NGQ6 314 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 REXO5Q96IC2 774 aaKnown RBP29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 MTHFD2LQ9H903 347 aaPredicted RBP29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 SLC6A13Q9NSD5 602 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 EDARQ9UNE0 448 aa29.54■■■□□ 2.32
SSSCA1-205ENST00000527920 CHRM4P08173 479 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 UGT2B10P36537 528 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 MVDP53602 400 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 COX20Q5RI15 118 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 DYDC1Q8WWB3 177 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 CCDC28BQ9BUN5 200 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 SRXN1Q9BYN0 137 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 SERINC1Q9NRX5 453 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 INTS9Q9NV88 658 aaKnown RBP29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 HEATR5AQ86XA9 2040 aa29.53■■■□□ 2.32
SSSCA1-205ENST00000527920 C16orf97H3BN30 126 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 RPS4Y1P22090 263 aaKnown RBP29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 SLC7A1P30825 629 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 CCKARP32238 428 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 RAC3P60763 192 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 STX1BP61266 288 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 DNAJC14Q6Y2X3 702 aaPredicted RBP29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 SPNS3Q6ZMD2 512 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 PNPT1Q8TCS8 783 aaKnown RBP29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 SLC25A43Q8WUT9 341 aaPredicted RBP29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 THUMPD1Q9NXG2 353 aaKnown RBP29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 CLEC4AQ9UMR7 237 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 AKAP9Q99996 3911 aa29.52■■■□□ 2.32
SSSCA1-205ENST00000527920 F8P00451 2351 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 CASKO14936 926 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 ANP32DO95626 131 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 NR2F1P10589 423 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 AGTR1P30556 359 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 KCNJ5P48544 419 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 IDH3AP50213 366 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 PPP2R2AP63151 447 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 IRX1P78414 480 aaPredicted RBP29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 PLAURQ03405 335 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 PLEKHM3Q6ZWE6 761 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 SLC43A2Q8N370 569 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 ARFGAP2Q8N6H7 521 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 NRGNQ92686 78 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 VPS33AQ96AX1 596 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 TPT1P8Q9HAU6 139 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 TMEM45AQ9NWC5 275 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 P2RX2Q9UBL9 471 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 ST6GALNAC2Q9UJ37 374 aa29.51■■■□□ 2.31
SSSCA1-205ENST00000527920 UQCRHLA0A096LP55 91 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 BCAS1O75363 584 aaPredicted RBP29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 HRGP04196 525 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 APOBEC1P41238 236 aaKnown RBP29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 MERTKQ12866 999 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 GNA13Q14344 377 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 FBXW10Q5XX13 1052 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 STON2Q8WXE9 905 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 ROBO4Q8WZ75 1007 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 GTF2H4Q92759 462 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 TACO1Q9BSH4 297 aaKnown RBP29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 QRSL1Q9H0R6 528 aaKnown RBP29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 FANCFQ9NPI8 374 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 CALML5Q9NZT1 146 aa29.5■■■□□ 2.31
SSSCA1-205ENST00000527920 C6orf10Q5SRN2 563 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 FCRLAQ7L513 359 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 STK32CQ86UX6 486 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 ATP6V1C2Q8NEY4 427 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 ABHD3Q8WU67 409 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 WFIKKN1Q96NZ8 548 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 CCDC106Q9BWC9 280 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 ZNF226Q9NYT6 803 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 KLHL13Q9P2N7 655 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 PRDM4Q9UKN5 801 aa29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 SPIN1Q9Y657 262 aaPredicted RBP29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 HRNRQ86YZ3 2850 aaPredicted RBP29.49■■■□□ 2.31
SSSCA1-205ENST00000527920 DBIP07108 87 aaKnown RBP29.48■■■□□ 2.31
SSSCA1-205ENST00000527920 FKBP2P26885 142 aaKnown RBP29.48■■■□□ 2.31
SSSCA1-205ENST00000527920 MAPK11Q15759 364 aa29.48■■■□□ 2.31
SSSCA1-205ENST00000527920 GRINAQ7Z429 371 aa29.48■■■□□ 2.31
SSSCA1-205ENST00000527920 EBF4Q9BQW3 602 aa29.48■■■□□ 2.31
SSSCA1-205ENST00000527920 DSPPQ9NZW4 1301 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 CLDN24A6NM45 220 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 FAAHO00519 579 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 PRKD3O94806 890 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 AQP5P55064 265 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 SYT14P1Q58G82 188 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 BEND4Q6ZU67 534 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 PEX5LQ8IYB4 626 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 ZNF563Q8TA94 476 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 WDR60Q8WVS4 1066 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 CKAP2Q8WWK9 683 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 CNOT9Q92600 299 aaKnown RBP29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 MED18Q9BUE0 208 aa29.47■■■□□ 2.31
SSSCA1-205ENST00000527920 A0A1W2PNR3 127 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms