RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PRR5P85299 388 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 ACSM1Q08AH1 577 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 SEZ6L2Q6UXD5 910 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 OR2AK2Q8NG84 335 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 OR1S2Q8NGQ3 325 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 INTS12Q96CB8 462 aaKnown RBP11.62□□□□□ -0.55
TSKU-203ENST00000527881 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 IER2Q9BTL4 223 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 AP5M1Q9H0R1 490 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 ZFP57Q9NU63 452 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 TMEM218A2RU14 115 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 RNGTTO60942 597 aaKnown RBP11.62□□□□□ -0.55
TSKU-203ENST00000527881 KLKB1P03952 638 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 SMIM6P0DI80 62 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 HTR2AP28223 471 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 ADH7P40394 386 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 TAF13Q15543 124 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 RPE65Q16518 533 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 TP53I3Q53FA7 332 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 UBE2NLQ5JXB2 153 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 PLEKHS1Q5SXH7 462 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 PRPF38BQ5VTL8 546 aaKnown RBP11.62□□□□□ -0.55
TSKU-203ENST00000527881 CRTC1Q6UUV9 634 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 TMED4Q7Z7H5 227 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 ASPGQ86U10 573 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 DNAAF1Q8NEP3 725 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 OR52L1Q8NGH7 329 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 DUSP19Q8WTR2 217 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 OR5P2Q8WZ92 322 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 SCAMP4Q969E2 229 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 PEX11GQ96HA9 241 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 COMMD9Q9P000 198 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 PCOLCE2Q9UKZ9 415 aa11.62□□□□□ -0.55
TSKU-203ENST00000527881 GREB1Q4ZG55 1949 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 OR2AT4A6NND4 320 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 GABARAPH6UMI1 98 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 SLC16A5O15375 505 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 HTR3BO95264 441 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 NR0B1P51843 470 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 KRT33BQ14525 404 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 SLCO4C1Q6ZQN7 724 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 FAM122BQ7Z309 247 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 BEST3Q8N1M1 668 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 ZNF614Q8N883 585 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 OR6K3Q8NGY3 331 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 SMPDL3BQ92485 455 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 S100A16Q96FQ6 103 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 LCORQ96JN0 433 aaPredicted RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 ZCCHC2Q9C0B9 1178 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 LHX6Q9UPM6 363 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 NTNG1Q9Y2I2 539 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 PRRC2BQ5JSZ5 2229 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 PTPRDP23468 1912 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 SNRPGP15A8MWD9 76 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 GYPBP06028 91 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 NDUFV2P19404 249 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 PTAFRP25105 342 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 S100PP25815 95 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 IMPA1P29218 277 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 NOS3P29474 1203 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 TBPL1P62380 186 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 LASP1Q14847 261 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 TRAM1Q15629 374 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 FAM26DQ5JW98 314 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 ZNF280BQ86YH2 543 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 GID4Q8IVV7 300 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 SAMD14Q8IZD0 417 aaPredicted RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 APCDD1Q8J025 514 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 CYB561A3Q8NBI2 242 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 FAM98AQ8NCA5 519 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 PAQR8Q8TEZ7 354 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 MRPL48Q96GC5 212 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 OR14A2Q96R54 314 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 PBX4Q9BYU1 374 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 SLC38A1Q9H2H9 487 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 EXO5Q9H790 373 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 ZNF629Q9UEG4 869 aaPredicted RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 ACAD8Q9UKU7 415 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 EXOGQ9Y2C4 368 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 EIF1BO60739 113 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 SNAPINO95295 136 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 S100A8P05109 93 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 BMP7P18075 431 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 BDKRB2P30411 391 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 EIF1P41567 113 aaKnown RBP11.61□□□□□ -0.55
TSKU-203ENST00000527881 ST3GAL3Q11203 375 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 PDE7AQ13946 482 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 ZNF311Q5JNZ3 666 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 TMEM71Q6P5X7 295 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 OR2W3Q7Z3T1 314 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 PHOSPHO1Q8TCT1 267 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms