RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CASP9P55211 416 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 MERTKQ12866 999 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 TNK1Q13470 666 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 ADAM5Q6NVV9 412 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 C3orf33Q6P1S2 294 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 ZNF100Q8IYN0 542 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 OR4A15Q8NGL6 344 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 SMAP2Q8WU79 429 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 TMEM234Q8WY98 164 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 MUCL1Q96DR8 90 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 BCO1Q9HAY6 547 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 PRSS50Q9UI38 385 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 JMJD1CQ15652 2540 aa19.86■□□□□ 0.77
TRAPPC4-208ENST00000527680 RNF103-CHMP3A0A140T963 221 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 A0A1W2PP18 115 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 LYZL6O75951 148 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 CPSF4O95639 269 aaKnown RBP19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 TFPIP10646 304 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 PGCP20142 388 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 OR3A2P47893 321 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 SESN3P58005 492 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 VEZF1Q14119 521 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 ZNF141Q15928 474 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 PDCD2Q16342 344 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 CLEC12BQ2HXU8 276 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 ARHGAP11BQ3KRB8 267 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 ATAD3BQ5T9A4 648 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 Q6ZT83 130 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 EIF3MQ7L2H7 374 aaKnown RBP19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 OLIG3Q7RTU3 272 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 LILRB1Q8NHL6 650 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 XAGE5Q8WWM1 108 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 NEUROG1Q92886 237 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 PSD2Q9BQI7 771 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 DPY30Q9C005 99 aa19.85■□□□□ 0.77
TRAPPC4-208ENST00000527680 ESPNB1AK53 854 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 SULT2B1O00204 365 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 CYTIPO60759 359 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 IDUAP35475 653 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 VSNL1P62760 191 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 BSPH1Q075Z2 132 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 PRIMA1Q86XR5 153 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 VPS37AQ8NEZ2 397 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 ZNF563Q8TA94 476 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 PIWIL2Q8TC59 973 aaKnown RBP19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 ST8SIA1Q92185 356 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 ZNF300Q96RE9 604 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 POTEKPQ9BYX7 375 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 OR51I1Q9H343 314 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 SERHL2Q9H4I8 314 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 KCNE5Q9UJ90 142 aa19.84■□□□□ 0.77
TRAPPC4-208ENST00000527680 SMAD9O15198 467 aaKnown RBP19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 UGT2B17O75795 530 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 H6PDO95479 791 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 SOD3P08294 240 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 OR12D1P0DN82 309 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 CDKN1AP38936 164 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 DIO1P49895 249 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 C21orf58P58505 322 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 CSNK2A1P68400 391 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 FAPQ12884 760 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 SKP2Q13309 424 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 ZNF672Q499Z4 452 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 TMPPEQ6ZT21 453 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 GALNT5Q7Z7M9 940 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 ATG4DQ86TL0 474 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 ANKRD46Q86W74 232 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 UBE2J2Q8N2K1 259 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 PKNOX2Q96KN3 472 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 AKTIPQ9H8T0 292 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 ING1Q9UK53 422 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 LIPT1Q9Y234 373 aa19.83■□□□□ 0.77
TRAPPC4-208ENST00000527680 CADP27708 2225 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 DPRXA6NFQ7 191 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 RNF223E7ERA6 249 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 RNASET2O00584 256 aaKnown RBP19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 ITM2AO43736 263 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 AGR2O95994 175 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 RYKP34925 604 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 PPA1Q15181 289 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 CHI3L2Q15782 390 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 SMU1Q2TAY7 513 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 KBTBD8Q8NFY9 601 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 RAB8BQ92930 207 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 ALG2Q9H553 416 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 ACER3Q9NUN7 267 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 WDR45Q9Y484 360 aa19.82■□□□□ 0.76
TRAPPC4-208ENST00000527680 PRSS51A0A1B0GVH4 220 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 ZNF724A8MTY0 619 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 KIAA1324LA8MWY0 1029 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 OVOL3O00110 214 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 ETV2O00321 342 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 TYROBPO43914 113 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 DANCRP0C864 163 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 MYZAPP0CAP1 466 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 GGT1P19440 569 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 UQCRC2P22695 453 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 ETV4P43268 484 aa19.81■□□□□ 0.76
TRAPPC4-208ENST00000527680 ETFDHQ16134 617 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms