RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ZNF433Q8N7K0 673 aaPredicted RBP12.58□□□□□ -0.4
CPSF1-201ENST00000526271 PSMA8Q8TAA3 256 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 METTL2AQ96IZ6 378 aaKnown RBP12.58□□□□□ -0.4
CPSF1-201ENST00000526271 MRGPRX4Q96LA9 322 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 STACQ99469 402 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.4
CPSF1-201ENST00000526271 CACNG6Q9BXT2 260 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
CPSF1-201ENST00000526271 PIGUQ9H490 435 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 GP6Q9HCN6 339 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 DUSP22Q9NRW4 184 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 SLC17A7Q9P2U7 560 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 DNAJC15Q9Y5T4 150 aa12.58□□□□□ -0.4
CPSF1-201ENST00000526271 A0A1W2PR80 420 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 FAM234BA2RU67 622 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ABCD4O14678 606 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 LY6HO94772 140 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 CHRNGP07510 517 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 LINC00032P0C843 101 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 FAM157CP0CG43 387 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 CPA3P15088 417 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ME2P23368 584 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 CDH11P55287 796 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 RAC3P60763 192 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 SLC25A3Q00325 362 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 MLC1Q15049 377 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 PPA1Q15181 289 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 STK11Q15831 433 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 CHRFAM7AQ494W8 412 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 VPS26BQ4G0F5 336 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 PDSS1Q5T2R2 415 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 CDC73Q6P1J9 531 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ZCCHC12Q6PEW1 402 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 RNF165Q6ZSG1 346 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ZNF525Q8N782 197 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ZNF527Q8NB42 609 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 KCNK9Q9NPC2 374 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 MED4Q9NPJ6 270 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ZCCHC3Q9NUD5 404 aaKnown RBP12.57□□□□□ -0.4
CPSF1-201ENST00000526271 STOML1Q9UBI4 398 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 ATP6V1HQ9UI12 483 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 SLC25A15Q9Y619 301 aa12.57□□□□□ -0.4
CPSF1-201ENST00000526271 TMEM120BA0PK00 339 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 F12P00748 615 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-201ENST00000526271 IGHV3-9P01782 118 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 C1QCP02747 245 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
CPSF1-201ENST00000526271 DHRS4L1P0CG22 281 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 TTKP33981 857 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 SERPINB4P48594 390 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 SUMO3P55854 103 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-201ENST00000526271 VLDLRP98155 873 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 SKP2Q13309 424 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 PTGR1Q14914 329 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 PCLAFQ15004 111 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 QPRTQ15274 297 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 DCST2Q5T1A1 773 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 GTF2IRD2BQ6EKJ0 949 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 ABLIM2Q6H8Q1 611 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 MTERF4Q7Z6M4 381 aaKnown RBP12.56□□□□□ -0.4
CPSF1-201ENST00000526271 GTF2IRD2Q86UP8 949 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 C10orf107Q8IVU9 208 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 CLEC4FQ8N1N0 589 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 KRTCAP2Q8N6L1 136 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 OR5D16Q8NGK9 328 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 ZFP28Q8NHY6 868 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 JADE3Q92613 823 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 CCDC126Q96EE4 140 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 C3orf30Q96M34 536 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 TNFRSF13CQ96RJ3 184 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 MANSC1Q9H8J5 431 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 FANCFQ9NPI8 374 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 MID2Q9UJV3 735 aa12.56□□□□□ -0.4
CPSF1-201ENST00000526271 GPC6Q9Y625 555 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-201ENST00000526271 SLC35F4A4IF30 521 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 OR5H1A6NKK0 313 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 ZNF724A8MTY0 619 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 PDLIM1O00151 329 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 SLC28A1O00337 649 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 AZIN1O14977 448 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 SCAMP2O15127 329 aaKnown RBP12.55□□□□□ -0.4
CPSF1-201ENST00000526271 C6orf47O95873 294 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-201ENST00000526271 BPGMP07738 259 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 IGHV4-31P0DP07 118 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 ATP12AP54707 1039 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 RPS26P62854 115 aaKnown RBP12.55□□□□□ -0.4
CPSF1-201ENST00000526271 LOXL1Q08397 574 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-201ENST00000526271 RASGEF1BQ0VAM2 473 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 SELENBP1Q13228 472 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 MAPK14Q16539 360 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 TIMM23BQ5SRD1 257 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 RFWD2Q8NHY2 731 aa12.55□□□□□ -0.4
CPSF1-201ENST00000526271 TMEM158Q8WZ71 300 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms