RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ETFAP13804 333 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 IL11P20809 199 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 APOBEC1P41238 236 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 NDUFAF6Q330K2 333 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 GTF2IRD2BQ6EKJ0 949 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 C3orf33Q6P1S2 294 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 GTF2IRD2Q86UP8 949 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 ZNF440Q8IYI8 595 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 GCNT2Q8N0V5 402 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 DPP10Q8N608 796 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 RFWD2Q8NHY2 731 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 SMPDL3BQ92485 455 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLC35B4Q969S0 331 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 GMPPAQ96IJ6 420 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 ZNF845Q96IR2 970 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 A4GALTQ9NPC4 353 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLC25A37Q9NYZ2 338 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 DCTN4Q9UJW0 460 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 NR5A2O00482 541 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 SYNGR4O95473 234 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 SNRPB2P08579 225 aaKnown RBP18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 IL7RP16871 459 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 NCF2P19878 526 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 KIR2DL2P43627 348 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 HTR3AP46098 478 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 CLK1P49759 484 aaKnown RBP18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 CCR4P51679 360 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 CARD18P57730 90 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 SESN3P58005 492 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 PLAURQ03405 335 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 GTDC1Q4AE62 458 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 RNF220Q5VTB9 566 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 HBMQ6B0K9 141 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 FAM214BQ7L5A3 538 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 OLIG3Q7RTU3 272 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 WDR60Q8WVS4 1066 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 STARD4Q96DR4 205 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 AURKBQ96GD4 344 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 SERINC1Q9NRX5 453 aa18.73■□□□□ 0.59
TRAPPC9-215ENST00000524162 UQCRHLA0A096LP55 91 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 A0A0G2JND7 137 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 CDHR4A6H8M9 788 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 EEF1E1-BLOC1S5C9J1V9 151 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 EEF1E1O43324 174 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 GPX2P18283 190 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 UQCRC1P31930 480 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 RAC3P60763 192 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 PAGE3Q5JUK9 113 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 GRINAQ7Z429 371 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 MSRB3Q8IXL7 192 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 FAM222BQ8WU58 562 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 OSTF1Q92882 214 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 ZNF524Q96C55 264 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 CCDC106Q9BWC9 280 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 QRSL1Q9H0R6 528 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 ARMC7Q9H6L4 198 aa18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 DNAJB12Q9NXW2 375 aaKnown RBP18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 LEF1Q9UJU2 399 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 SPIN1Q9Y657 262 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC9-215ENST00000524162 FREM1Q5H8C1 2179 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 TNFSF11O14788 317 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 CXCL13O43927 109 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 SS18L1O75177 396 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 AQP8O94778 261 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 CGAP01215 116 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 UQCRBP14927 111 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 ETS2P15036 469 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 KIR2DL3P43628 341 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 RNPS1Q15287 305 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 ZNF239Q16600 458 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 LIN52Q52LA3 116 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 PLXDC2Q6UX71 529 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 DLEU7Q6UYE1 221 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 PLEKHM3Q6ZWE6 761 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLC43A2Q8N370 569 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 RNF128Q8TEB7 428 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 ZNF559Q9BR84 538 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 TACO1Q9BSH4 297 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 RBM24Q9BX46 236 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 PRRG4Q9BZD6 226 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 TMEM38AQ9H6F2 299 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 ELOVL5Q9NYP7 299 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 VAPAQ9P0L0 249 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLAMF8Q9P0V8 285 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 ZNF232Q9UNY5 417 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 IFT52Q9Y366 437 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 NDUFAF1Q9Y375 327 aa18.71■□□□□ 0.59
TRAPPC9-215ENST00000524162 CSMD1Q96PZ7 3565 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 FAM221AA4D161 298 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 EVPLLA8MZ36 301 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 CYP7B1O75881 506 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 BCHEP06276 602 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 ADSLP30566 484 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 RNF144AP50876 292 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 AGFG1P52594 562 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 TLE4Q04727 773 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 AKAP6Q13023 2319 aa18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 LARS2Q15031 903 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 DAZAP2Q15038 168 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-215ENST00000524162 TMEM176BQ3YBM2 270 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms