RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 PAIP1Q9H074 479 aaKnown RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 EXOSC3Q9NQT5 275 aaKnown RBP17.13■□□□□ 0.33
FBXO28-205ENST00000523990 P2RX2Q9UBL9 471 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 CLEC4AQ9UMR7 237 aa17.13■□□□□ 0.33
FBXO28-205ENST00000523990 ZNF469Q96JG9 3925 aaPredicted RBP17.12■□□□□ 0.33
FBXO28-205ENST00000523990 AGAP5A6NIR3 686 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 NR2F1P10589 423 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 PCYT1AP49585 367 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 CARD18P57730 90 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 SESN3P58005 492 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 KCNJ10P78508 379 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 DAZAP2Q15038 168 aaPredicted RBP17.12■□□□□ 0.33
FBXO28-205ENST00000523990 TMEM176BQ3YBM2 270 aaPredicted RBP17.12■□□□□ 0.33
FBXO28-205ENST00000523990 SLC2A7Q6PXP3 512 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 OR6K3Q8NGY3 331 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 RNF128Q8TEB7 428 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 STON2Q8WXE9 905 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 CPNE4Q96A23 557 aaPredicted RBP17.12■□□□□ 0.33
FBXO28-205ENST00000523990 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.12■□□□□ 0.33
FBXO28-205ENST00000523990 CCDC167Q9P0B6 97 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 EMC9Q9Y3B6 208 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 PCDHB14Q9Y5E9 798 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 DSPPQ9NZW4 1301 aa17.12■□□□□ 0.33
FBXO28-205ENST00000523990 AKAP6Q13023 2319 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 ADAM11O75078 769 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 PLGP00747 810 aaPredicted RBP17.11■□□□□ 0.33
FBXO28-205ENST00000523990 CCKARP32238 428 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 CRATP43155 626 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 DSTNP60981 165 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 FAM27E3Q08E93 113 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 BLOC1S3Q6QNY0 202 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 ATP6V1C2Q8NEY4 427 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 WDR60Q8WVS4 1066 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 CLEC4MQ9H2X3 399 aaPredicted RBP17.11■□□□□ 0.33
FBXO28-205ENST00000523990 MTHFD2LQ9H903 347 aaPredicted RBP17.11■□□□□ 0.33
FBXO28-205ENST00000523990 TIGARQ9NQ88 270 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 GLRX2Q9NS18 164 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 ACER3Q9NUN7 267 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 DNAJB12Q9NXW2 375 aaKnown RBP17.11■□□□□ 0.33
FBXO28-205ENST00000523990 PROCRQ9UNN8 238 aa17.11■□□□□ 0.33
FBXO28-205ENST00000523990 MAP1AP78559 2803 aaPredicted RBP17.11■□□□□ 0.33
FBXO28-205ENST00000523990 ABCA4P78363 2273 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 FREM1Q5H8C1 2179 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 BCHEP06276 602 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 AGTR1P30556 359 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 SLC7A1P30825 629 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 CD79BP40259 229 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 ATP4BP51164 291 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 IRX1P78414 480 aaPredicted RBP17.1■□□□□ 0.33
FBXO28-205ENST00000523990 PLEKHM3Q6ZWE6 761 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 ARFGAP2Q8N6H7 521 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 ABHD3Q8WU67 409 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 ROBO4Q8WZ75 1007 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 CNOT9Q92600 299 aaKnown RBP17.1■□□□□ 0.33
FBXO28-205ENST00000523990 PMM1Q92871 262 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 SPDL1Q96EA4 605 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 DACH2Q96NX9 599 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
FBXO28-205ENST00000523990 SLC52A3Q9NQ40 469 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 ZNF446Q9NWS9 450 aa17.1■□□□□ 0.33
FBXO28-205ENST00000523990 A0A096LPI6 279 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 A0A1W2PNR3 127 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 SH3D21A4FU49 640 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 NR5A2O00482 541 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 EDF1O60869 148 aaKnown RBP17.09■□□□□ 0.33
FBXO28-205ENST00000523990 DBIP07108 87 aaKnown RBP17.09■□□□□ 0.33
FBXO28-205ENST00000523990 TFPTP0C1Z6 253 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 POU2F1P14859 743 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 IL7RP16871 459 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 RYKP34925 604 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 CRISP3P54108 245 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 CTBP2P56545 445 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 MERTKQ12866 999 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 SQLEQ14534 574 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 LRIF1Q5T3J3 769 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 MRPL2Q5T653 305 aaKnown RBP17.09■□□□□ 0.33
FBXO28-205ENST00000523990 ZNF610Q8N9Z0 462 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 ZNF563Q8TA94 476 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 SLC38A5Q8WUX1 472 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 NRGNQ92686 78 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 THOC1Q96FV9 657 aaKnown RBP17.09■□□□□ 0.33
FBXO28-205ENST00000523990 CCDC106Q9BWC9 280 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 TMEM45AQ9NWC5 275 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 ELOVL5Q9NYP7 299 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 TESMINQ9Y4I5 508 aa17.09■□□□□ 0.33
FBXO28-205ENST00000523990 AP3D1O14617 1153 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 PABPC4LP0CB38 370 aaKnown RBP17.08■□□□□ 0.32
FBXO28-205ENST00000523990 UGT2B10P36537 528 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 RAC3P60763 192 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 FADDQ13158 208 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 GNA13Q14344 377 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 GTF2IRD2BQ6EKJ0 949 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 FCRLAQ7L513 359 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 GRINAQ7Z429 371 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 GTF2IRD2Q86UP8 949 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 MSRB3Q8IXL7 192 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 PEX5LQ8IYB4 626 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms