RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, human

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKP1-211	ENST00000523359	LIPN	Q5VXI9	398 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	PLPP4	Q5VZY2	271 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	SNRNP48	Q6IEG0	339 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	H3F3C	Q6NXT2	135 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	SCYL2	Q6P3W7	929 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	RNASEK	Q6P5S7	137 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	CCDC137	Q6PK04	289 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	DOK6	Q6PKX4	331 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	TMEM107	Q6UX40	140 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	C3P1	Q6ZMU1	363 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	CENPU	Q71F23	418 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	RBM45	Q8IUH3	476 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ICA1L	Q8NDH6	482 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ENKUR	Q8TC29	256 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	FANK1	Q8TC84	345 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	P3H4	Q92791	437 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ZNF274	Q96GC6	653 aa	Predicted RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ZNF514	Q96K75	400 aa	Predicted RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	TRIM51	Q9BSJ1	452 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	CCM2	Q9BSQ5	444 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	API5	Q9BZZ5	524 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	DERL2	Q9GZP9	239 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ZNF665	Q9H7R5	613 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ELOVL3	Q9HB03	270 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	MCCC2	Q9HCC0	563 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	UFSP2	Q9NUQ7	469 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	ELOVL2	Q9NXB9	296 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	SENP1	Q9P0U3	644 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	CYTH4	Q9UIA0	394 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	CSDC2	Q9Y534	153 aa	Known RBP	4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	PPIAL4A	Q9Y536	164 aa		4.09	□□□□□ -1.75
SKP1-211	ENST00000523359	PCNX3	Q9H6A9	2034 aa		4.09	□□□□□ -1.76
SKP1-211	ENST00000523359	MROH7-TTC4	A0A0A0MT08	1334 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SRRM4	A7MD48	611 aa	Known RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	GOLGA8R	I6L899	631 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SOCS3	O14543	225 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	GPR171	O14626	319 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	CHUK	O15111	745 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ARPC1B	O15143	372 aa	Known RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	RS1	O15537	224 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	P2RX6	O15547	441 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ANGPTL1	O95841	491 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SERPINE2	P07093	398 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	CHRNG	P07510	517 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ERCC1	P07992	297 aa	Predicted RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	YWHAB	P31946	246 aa	Known RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	CBX5	P45973	191 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SLC7A2	P52569	658 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	NDST2	P52849	883 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	BACE1	P56817	501 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PRPS1	P60891	318 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PJVK	Q0ZLH3	352 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ILK	Q13418	452 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	FRMPD4	Q14CM0	1322 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	VAMP3	Q15836	100 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SYPL1	Q16563	259 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	MICB	Q29980	383 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	CMPK2	Q5EBM0	449 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	TMEM31	Q5JXX7	168 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	CDKL4	Q5MAI5	379 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	MFSD14C	Q5VZR4	134 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ASCL4	Q6XD76	172 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ZFAND4	Q86XD8	727 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SELENOH	Q8IZQ5	122 aa	Known RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	GABRG1	Q8N1C3	465 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ELMOD1	Q8N336	334 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	FBXL16	Q8N461	479 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PRSS33	Q8NF86	280 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	OR7G2	Q8NG99	324 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	RHEBL1	Q8TAI7	183 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	UBTD2	Q8WUN7	234 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PHYHIP	Q92561	330 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PPP1R14B	Q96C90	147 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ZNF689	Q96CS4	500 aa	Predicted RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	RAB39B	Q96DA2	213 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ASB9	Q96DX5	294 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	SERAC1	Q96JX3	654 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	TSNARE1	Q96NA8	513 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	LGMN	Q99538	433 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	VGLL1	Q99990	258 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PARD6B	Q9BYG5	372 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	NARFL	Q9H6Q4	476 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	DHX33	Q9H6R0	707 aa	Known RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	DCLRE1B	Q9H816	532 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	VIPAS39	Q9H9C1	493 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	TREX1	Q9NSU2	369 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	MS4A12	Q9NXJ0	267 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ADA2	Q9NZK5	511 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	DCDC2	Q9UHG0	476 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	ADAM28	Q9UKQ2	775 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	PSMD13	Q9UNM6	376 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	RBMX2	Q9Y388	322 aa	Known RBP	4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	NPTN	Q9Y639	398 aa		4.08	□□□□□ -1.76
SKP1-211	ENST00000523359	IQCM	A0A1B0GVH7	501 aa		4.07	□□□□□ -1.76
SKP1-211	ENST00000523359	ESYT2	A0FGR8	921 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms