RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LPCAT4Q643R3 524 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 WBP2NLQ6ICG8 309 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 INO80CQ6PI98 192 aaPredicted RBP11.9□□□□□ -0.5
CPNE3-205ENST00000522240 LRRC69Q6ZNQ3 347 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 GDF7Q7Z4P5 450 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 TMEM179BQ7Z7N9 219 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF227Q86WZ6 799 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 FADS6Q8N9I5 356 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 DUSP19Q8WTR2 217 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 DNAJA4Q8WW22 397 aaPredicted RBP11.9□□□□□ -0.5
CPNE3-205ENST00000522240 ST8SIA1Q92185 356 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 DTNBP1Q96EV8 351 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 MPP4Q96JB8 637 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 ALPK1Q96QP1 1244 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 PROK2Q9HC23 129 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 CTPS2Q9NRF8 586 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 USE1Q9NZ43 259 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 LRFN1Q9P244 771 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 RHCGQ9UBD6 479 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 RPS6KB2Q9UBS0 482 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 TMCC3Q9ULS5 477 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 SLC7A7Q9UM01 511 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 U3KQV3 271 aa11.9□□□□□ -0.5
CPNE3-205ENST00000522240 MED13Q9UHV7 2174 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 A6NL46 340 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 H0YJX3 145 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ETV2O00321 342 aaPredicted RBP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 CDC40O60508 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 CCNB2O95067 398 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 WDPCPO95876 746 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 THY1P04216 161 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 RYKP34925 604 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 CD96P40200 585 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 RBM34P42696 430 aaKnown RBP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 CCL11P51671 97 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 PPP2R2BQ00005 443 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 DAG1Q14118 895 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 OR1C1Q15619 314 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 MICAQ29983 383 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 DCST1Q5T197 706 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 PPP4R4Q6NUP7 873 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ULK3Q6PHR2 472 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 LINC00696Q6ZRV3 163 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ZBTB49Q6ZSB9 765 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 MDGA2Q7Z553 956 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 STK32CQ86UX6 486 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 CBR4Q8N4T8 237 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 MDS2Q8NDY4 140 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 FDCSPQ8NFU4 85 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 OR2M3Q8NG83 312 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 OR10G2Q8NGC3 310 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 SLC7A13Q8TCU3 470 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 GPR119Q8TDV5 335 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 GIPC3Q8TF64 312 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ACOT11Q8WXI4 607 aaPredicted RBP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 DNAJC9Q8WXX5 260 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 HAS2Q92819 552 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF597Q96LX8 424 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 RBM4BQ9BQ04 359 aaKnown RBP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF426Q9BUY5 554 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 RBM4Q9BWF3 364 aaKnown RBP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 TAS2R10Q9NYW0 307 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 SELENONQ9NZV5 590 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 NTNG1Q9Y2I2 539 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 PCDHGB6Q9Y5F9 930 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 PCDHGA9Q9Y5G4 932 aaKnown RBP11.89□□□□□ -0.51
CPNE3-205ENST00000522240 HRH3Q9Y5N1 445 aa11.89□□□□□ -0.51
CPNE3-205ENST00000522240 SH3PXD2BA1X283 911 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 C17orf51A8MQB3 221 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SOCS2O14508 198 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 EI24O14681 340 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 TRIM3O75382 744 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SLC25A12O75746 678 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 NUDT14O95848 222 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 PNMTP11086 282 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 GP1BBP13224 206 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ANXA8P13928 327 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF26P17031 533 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 MST1P26927 711 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ITPKBP27987 946 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SLC1A3P43003 542 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 IDH2P48735 452 aaKnown RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 MASP1P48740 699 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ST13P50502 369 aaKnown RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ALDH3A2P51648 485 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 PPP1R8Q12972 351 aaKnown RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 RAPSNQ13702 412 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 QPRTQ15274 297 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SOWAHCQ53LP3 525 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SLC25A53Q5H9E4 307 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ALG10BQ5I7T1 473 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms