RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DCTP40126 519 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CCR8P51685 355 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PDX1P52945 283 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SLC18A1P54219 525 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CLDN6P56747 220 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 DNAJB13P59910 316 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 MAGOHP61326 146 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NAA20P61599 178 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TBPL1P62380 186 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 HERVK_113P63132 956 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CSNK1G2P78368 415 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ACY1Q03154 408 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ASPHQ12797 758 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CDC16Q13042 620 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 EIF3IQ13347 325 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TSTA3Q13630 321 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 IL11RAQ14626 422 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 C16orf72Q14CZ0 275 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ZIC1Q15915 447 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PDK4Q16654 411 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CCDC153Q494R4 210 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 UNC50Q53HI1 259 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 LRIF1Q5T3J3 769 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 LRRC70Q7Z2Q7 622 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PAQR7Q86WK9 346 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 C17orf64Q86WR6 236 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 MARCH9Q86YJ5 346 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SLC22A9Q8IVM8 553 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 FBXO39Q8N4B4 442 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TEX9Q8N6V9 391 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 BMPERQ8N8U9 685 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SNX31Q8N9S9 440 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CCDC63Q8NA47 563 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 POC5Q8NA72 575 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF485Q8NCK3 441 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 OR4K1Q8NGD4 311 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 WDR36Q8NI36 951 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TCP10LQ8TDR4 215 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SLC5A11Q8WWX8 675 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 EXT2Q93063 718 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NEIL2Q969S2 332 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PYCR2Q96C36 320 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CCDC126Q96EE4 140 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 L3HYPDHQ96EM0 354 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 WDR34Q96EX3 536 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ELMOD3Q96FG2 381 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 MED8Q96G25 268 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ATP6V1G3Q96LB4 118 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PRAP1Q96NZ9 151 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 FAM111AQ96PZ2 611 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SERINC2Q96SA4 455 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 LITAFQ99732 161 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SRSF8Q9BRL6 282 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 DPH7Q9BTV6 452 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ACAT2Q9BWD1 397 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ERVK-6Q9BXR3 956 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TEX12Q9BXU0 123 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 IQCGQ9H095 443 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PIGMQ9H3S5 423 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PLK3Q9H4B4 646 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 EHD1Q9H4M9 534 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NT5DC2Q9H857 520 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PELI2Q9HAT8 420 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ZBTB20Q9HC78 741 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 FAM60AQ9NP50 221 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PDE7BQ9NP56 450 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 MRPS30Q9NP92 439 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 FBXO8Q9NRD0 319 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 DNAJC11Q9NVH1 559 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SOHLH2Q9NX45 425 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SLC39A1Q9NY26 324 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SLC17A7Q9P2U7 560 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 OPTCQ9UBM4 332 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PILRAQ9UKJ1 303 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PLCL2Q9UPR0 1127 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SLC22A14Q9Y267 594 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 BTRCQ9Y297 605 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CMAHPQ9Y471 501 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ANGPTL3Q9Y5C1 460 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 MMP24Q9Y5R2 645 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PLXNA2O75051 1894 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TRPM6Q9BX84 2022 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 EML5Q05BV3 1969 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 THADAQ6YHU6 1953 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 MUC6Q6W4X9 2439 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 A0A0J9YVX5 310 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1W2PNU3 283 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM120BA0PK00 339 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 EFCAB7A8K855 629 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 A8MV72 311 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CDRT15L2A8MXV6 281 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 H0YGG7 62 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 H3BQF6 201 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 E2F3O00716 465 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TXNDC9O14530 226 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OR7A17O14581 309 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 POLR1CO15160 346 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SMAD9O15198 467 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NVLO15381 856 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms