RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 OR10A7Q8NGE5 316 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 KCNA7Q96RP8 456 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 NIPSNAP3BQ9BS92 247 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 TCHPQ9BT92 498 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRIM6Q9C030 488 aaPredicted RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 RHBGQ9H310 441 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 IMPAD1Q9NX62 359 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 IL36GQ9NZH8 169 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 SAMD4AQ9UPU9 718 aaKnown RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 PRSS21Q9Y6M0 314 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ANKRD50Q9ULJ7 1429 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 ERCC6L2Q5T890 1561 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 CFAP74Q9C0B2 1584 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 HECW2Q9P2P5 1572 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 SIGLEC1Q9BZZ2 1709 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 PIK3C2BO00750 1634 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 CAMSAP1Q5T5Y3 1602 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 KIDINS220Q9ULH0 1771 aa2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 CFAP65Q6ZU64 1925 aaKnown RBP2.64□□□□□ -1.99
HMGN1P28-201ENST00000521340 CLTCQ00610 1675 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ROCK2O75116 1388 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 HCFC1P51610 2035 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 IGHV3-35A0A0C4DH35 117 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 LOC100131303A0A0U1RQF7 123 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 A0A1B0GTH9 108 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRABD2BA6NFA1 517 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 OR6C65A6NJZ3 312 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ACOD1A6NK06 481 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 CCT8L1PA6NM43 557 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 SNTNA6NMZ2 147 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 G3V3Y1 287 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 G3V4G9 280 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 RS1O15537 224 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PHF1O43189 567 aaPredicted RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 LCMT2O60294 686 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 LYPD3O95274 346 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 CD55P08174 381 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 GIG44P09565 113 aaPredicted RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRIM49P0CI25 452 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRIM49CP0CI26 452 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 IGHV1-2P23083 117 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ATP5A1P25705 553 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 IL2RGP31785 369 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PTGDSP41222 190 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 CCT3P49368 545 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 HLCSP50747 726 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 HSPA2P54652 639 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 FCHO2Q0JRZ9 810 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 BST1Q10588 318 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 KCNJ11Q14654 390 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 GANABQ14697 944 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 SLC15A2Q16348 729 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ISXQ2M1V0 245 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 CCDC183Q5T5S1 534 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 TMEM225Q6GV28 225 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 DHDDSQ86SQ9 333 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 HIPK1Q86Z02 1210 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 SLC22A18ASQ8N1D0 253 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 CSNK1A1LQ8N752 337 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 OR2T33Q8NG76 320 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 SCFD1Q8WVM8 642 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 TADA1Q96BN2 335 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PPP1R16AQ96I34 528 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 SOSTQ9BQB4 213 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 DPH7Q9BTV6 452 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PPDPFQ9H3Y8 114 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 AZI2Q9H6S1 392 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PANK3Q9H999 370 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PAK5Q9P286 719 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 SPRR3Q9UBC9 169 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 PRODH2Q9UF12 536 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF639Q9UID6 485 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 RPH3ALQ9UNE2 315 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 AK6Q9Y3D8 172 aaKnown RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 OARD1Q9Y530 152 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 TIMM10BQ9Y5J6 103 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 N4BP2Q86UW6 1770 aaPredicted RBP2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ATP10BO94823 1461 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ERCC6Q03468 1493 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 ARHGAP5Q13017 1502 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 EFCAB6Q5THR3 1501 aa2.63□□□□□ -1.99
HMGN1P28-201ENST00000521340 INSRP06213 1382 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 KTN1Q86UP2 1357 aaKnown RBP2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 ANKRD30AQ9BXX3 1397 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 SETD1AO15047 1707 aaKnown RBP2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 ADGRB2O60241 1585 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 DLG5Q8TDM6 1919 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 SETBP1Q9Y6X0 1596 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 POGZQ7Z3K3 1410 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 ERBINQ96RT1 1412 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 TRAV9-2A0A087WT02 112 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 A0A087WWV3 80 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 A0A0J9YWU9 116 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 CCDC169A6NNP5 214 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF716A6NP11 495 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 HMMRO75330 724 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 ZNF735P0CB33 412 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 CALB2P22676 271 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 FASP25445 335 aa2.62□□□□□ -1.99
HMGN1P28-201ENST00000521340 ACVR1BP36896 505 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms