RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 MED17Q9NVC6 651 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 FBXO34Q9NWN3 711 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 MKS1Q9NXB0 559 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ZNF226Q9NYT6 803 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ATP6V1HQ9UI12 483 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 PROCRQ9UNN8 238 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 VDAC3Q9Y277 283 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 TMED5Q9Y3A6 229 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 NF1P21359 2839 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ABCA2Q9BZC7 2435 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 C22orf46C9J442 243 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 IGHA1P01876 353 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 ALOX5P09917 674 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 FCGR2AP12318 317 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 EFNA1P20827 205 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 ALDH3A1P30838 453 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 ASMTP46597 345 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 RPL38P63173 70 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 MLC1Q15049 377 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 PLPPR5Q32ZL2 321 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 ARL13AQ5H913 290 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 CPTPQ5TA50 214 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 ZNF550Q7Z398 422 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 R3HCC1LQ7Z5L2 792 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 GALNT10Q86SR1 603 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 BIVMQ86UB2 503 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 TRABD2AQ86V40 505 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 MISPQ8IVT2 679 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 WDR75Q8IWA0 830 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 LRRC75A-AS1Q8N1F1 130 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 BANPQ8N9N5 519 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 GATSQ8NAP1 163 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 OR10D3Q8NH80 312 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 OR2V1Q8NHB1 315 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 FBXO30Q8TB52 745 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 POC1BQ8TC44 478 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 TWIST2Q8WVJ9 160 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 ZBTB8AQ96BR9 441 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 MTERF3Q96E29 417 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 FAM120BQ96EK7 910 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 PIK3IP1Q96FE7 263 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 MS4A4EQ96PG1 132 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 SMR3AQ99954 134 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 MED18Q9BUE0 208 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 UBQLN4Q9NRR5 601 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 PAQR5Q9NXK6 330 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 CLEC4AQ9UMR7 237 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 FIS1Q9Y3D6 152 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 DOCK7Q96N67 2140 aa8.29□□□□□ -1.08
CTNNA1-221ENST00000520339 A0A0J9YW62 118 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 A0A1W2PQD3 144 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 TMEM120BA0PK00 339 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 TMEM233B4DJY2 109 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 PIP5K1BO14986 540 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 ARHGEF9O43307 516 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 CXCL13O43927 109 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 SHOX2O60902 331 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 SS18L1O75177 396 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 CHEK2O96017 543 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 OPN1LWP04000 364 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 INHBBP09529 407 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 LINGO3P0C6S8 592 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 LAMP1P11279 417 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 MDH1P40925 334 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 KCNJ5P48544 419 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 PRIM2P49643 509 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 GNGT1P63211 74 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 LASP1Q14847 261 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 CD226Q15762 336 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 GALNTL6Q49A17 601 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 XKR7Q5GH72 579 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 CCNJQ5T5M9 372 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 STAC2Q6ZMT1 411 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 DDIASQ8IXT1 998 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 COX18Q8N8Q8 333 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 OR7A2PQ8NGA2 310 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 PSMA8Q8TAA3 256 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 OR5P2Q8WZ92 322 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 OSTF1Q92882 214 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 PIGTQ969N2 578 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 OTUB1Q96FW1 271 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 ZC3HAV1LQ96H79 300 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 GMPPAQ96IJ6 420 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 APOPT1Q96IL0 206 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 RNF145Q96MT1 663 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 STACQ99469 402 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 BTBD2Q9BX70 525 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 PRRG4Q9BZD6 226 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 KLHL4Q9C0H6 718 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 PIGUQ9H490 435 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 DUSP22Q9NRW4 184 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 GIN1Q9NXP7 522 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 NKIRAS1Q9NYS0 192 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 GIMAP2Q9UG22 337 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 ROS1P08922 2347 aa8.28□□□□□ -1.08
CTNNA1-221ENST00000520339 TMEM114B3SHH9 223 aa8.27□□□□□ -1.09
CTNNA1-221ENST00000520339 SCDO00767 359 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms