RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 SPATA21Q7Z572 469 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 CPLX4Q7Z7G2 160 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 GGNQ86UU5 652 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 CNEP1R1Q8N9A8 125 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 PCYOX1LQ8NBM8 494 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 NFKBIDQ8NI38 313 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 FNDC9Q8TBE3 224 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 C10orf82Q8WW14 230 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 CNOT9Q92600 299 aaKnown RBP17.15■□□□□ 0.34
FAM49B-217ENST00000520254 ZNF845Q96IR2 970 aaPredicted RBP17.15■□□□□ 0.34
FAM49B-217ENST00000520254 ZNF607Q96SK3 696 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 SH3GL1Q99961 368 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 SLC24A3Q9HC58 644 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 DNAJB12Q9NXW2 375 aaKnown RBP17.15■□□□□ 0.34
FAM49B-217ENST00000520254 SLC13A4Q9UKG4 626 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 DSPPQ9NZW4 1301 aa17.15■□□□□ 0.34
FAM49B-217ENST00000520254 SETXQ7Z333 2677 aaKnown RBP17.14■□□□□ 0.34
FAM49B-217ENST00000520254 TRBV5-3A0A0A0MS03 114 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 MRASO14807 208 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 CXCL13O43927 109 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 TGM6O95932 706 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 CRHP06850 196 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 PABPC4LP0CB38 370 aaKnown RBP17.14■□□□□ 0.33
FAM49B-217ENST00000520254 ARAFP10398 606 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 UQCRC1P31930 480 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 CARD18P57730 90 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 SESN3P58005 492 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 SCARB2Q14108 478 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 TMEM176BQ3YBM2 270 aaPredicted RBP17.14■□□□□ 0.33
FAM49B-217ENST00000520254 RUNDC3AQ59EK9 446 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 SLC25A53Q5H9E4 307 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 COQ5Q5HYK3 327 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 RNF220Q5VTB9 566 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 PLXDC2Q6UX71 529 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 DLEU7Q6UYE1 221 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 ZNF836Q6ZNA1 936 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 ZNF550Q7Z398 422 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 GRINAQ7Z429 371 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 VRK2Q86Y07 508 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 SLC25A43Q8WUT9 341 aaPredicted RBP17.14■□□□□ 0.33
FAM49B-217ENST00000520254 FIG4Q92562 907 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 ANKRD27Q96NW4 1050 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 NPAS1Q99742 590 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 KLHDC3Q9BQ90 382 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 CPPED1Q9BRF8 314 aaPredicted RBP17.14■□□□□ 0.33
FAM49B-217ENST00000520254 PIGMQ9H3S5 423 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 BCL2L10Q9HD36 194 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 ACER3Q9NUN7 267 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 GMEB1Q9Y692 573 aa17.14■□□□□ 0.33
FAM49B-217ENST00000520254 ARHGAP21Q5T5U3 1957 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 C19orf84I3L1E1 186 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 ADAMDEC1O15204 470 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 TFPIP10646 304 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 ETS2P15036 469 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 GPX2P18283 190 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 PEX19P40855 299 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 APOBEC1P41238 236 aaKnown RBP17.13■□□□□ 0.33
FAM49B-217ENST00000520254 IDH2P48735 452 aaKnown RBP17.13■□□□□ 0.33
FAM49B-217ENST00000520254 AGFG1P52594 562 aaKnown RBP17.13■□□□□ 0.33
FAM49B-217ENST00000520254 MTPNP58546 118 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 GNGT1P63211 74 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 GTF2IRD2BQ6EKJ0 949 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 PLEKHM3Q6ZWE6 761 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 GTF2IRD2Q86UP8 949 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 RETREG3Q86VR2 466 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 LIX1LQ8IVB5 337 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 C11orf65Q8NCR3 313 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 CPNE4Q96A23 557 aaPredicted RBP17.13■□□□□ 0.33
FAM49B-217ENST00000520254 ELAC2Q9BQ52 826 aaKnown RBP17.13■□□□□ 0.33
FAM49B-217ENST00000520254 SPATA9Q9BWV2 254 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 TMEM38AQ9H6F2 299 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 GID8Q9NWU2 228 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 FOXD3Q9UJU5 478 aaPredicted RBP17.13■□□□□ 0.33
FAM49B-217ENST00000520254 PACSIN3Q9UKS6 424 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 EMC9Q9Y3B6 208 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 PCNX1Q96RV3 2341 aa17.13■□□□□ 0.33
FAM49B-217ENST00000520254 A0A0J9YW62 118 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 CDHR4A6H8M9 788 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 PRORSD1PA6NEY8 169 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 SERPINB7O75635 380 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 PGM3O95394 542 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 NPPAP01160 153 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 CD1EP15812 388 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 IL11P20809 199 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 FKBP2P26885 142 aaKnown RBP17.12■□□□□ 0.33
FAM49B-217ENST00000520254 LSP1P33241 339 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 CTBP2P56545 445 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 SIRPAP78324 504 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 CAPRIN1Q14444 709 aaKnown RBP17.12■□□□□ 0.33
FAM49B-217ENST00000520254 MAPK11Q15759 364 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 REP15Q6BDI9 236 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 SLC30A8Q8IWU4 369 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 RELL2Q8NC24 303 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-217ENST00000520254 HIPK4Q8NE63 616 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 OSTF1Q92882 214 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 OR5B2Q96R09 309 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 SPOCK3Q9BQ16 436 aa17.12■□□□□ 0.33
FAM49B-217ENST00000520254 MED12Q93074 2177 aa17.11■□□□□ 0.33
FAM49B-217ENST00000520254 LOC100653049A0A140TA62 436 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms