RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 TMEM184AQ6ZMB5 413 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 GDPD3Q7L5L3 318 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 LPCAT2Q7L5N7 544 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 NRMQ8IXM6 262 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 C12orf56Q8IXR9 622 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 CCDC170Q8IYT3 715 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 MYOCDQ8IZQ8 938 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 C6orf223Q8N319 242 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 NKAIN3Q8N8D7 197 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 CCNYQ8ND76 341 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 OR8H1Q8NGG4 311 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 OR52E1Q8NGJ3 308 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 OR6X1Q8NH79 312 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 SLC5A11Q8WWX8 675 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 NDRG1Q92597 394 aaKnown RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 UPRTQ96BW1 309 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 RIOK1Q9BRS2 568 aaKnown RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 DDX47Q9H0S4 455 aaKnown RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 RHOJQ9H4E5 214 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 SLC25A22Q9H936 323 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 DMAP1Q9NPF5 467 aaPredicted RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 SLC25A37Q9NYZ2 338 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 CNOT2Q9NZN8 540 aaKnown RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 DEC1Q9P2X7 70 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 IL20RAQ9UHF4 553 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 CRLS1Q9UJA2 301 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 DNPEPQ9ULA0 475 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF490Q9ULM2 529 aaPredicted RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 TRAPPC4Q9Y296 219 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 TDRKHQ9Y2W6 561 aaKnown RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 TUBGCP6Q96RT7 1819 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 CUX2O14529 1486 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 IGKV1D-8A0A087WSZ0 117 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 RNF222A6NCQ9 220 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 OR6C65A6NJZ3 312 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF233A6NK53 670 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 PP2D1A8MPX8 630 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 KIF2AO00139 706 aaPredicted RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 HSF2BPO75031 334 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 SS18L1O75177 396 aaPredicted RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 STX11O75558 287 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 SLITRK3O94933 977 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 IGKV4-1P06312 121 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 ABHD2P08910 425 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 RNASE2P10153 161 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 ANXA3P12429 323 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 RNH1P13489 461 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 MUTP22033 750 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF763Q0D2J5 394 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 CCDC173Q0VFZ6 552 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 CUL1Q13616 776 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 EXOSC2Q13868 293 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 LAGE3Q14657 143 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 LASP1Q14847 261 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 CHI3L2Q15782 390 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 NDUFA9Q16795 377 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 FAM133BQ5BKY9 247 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 PRR9Q5T870 116 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 C6orf89Q6UWU4 347 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 BRD3OSQ6XYD6 125 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 ACOT7LQ6ZUV0 252 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 LRRC70Q7Z2Q7 622 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 LEMD2Q8NC56 503 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 STKLD1Q8NE28 680 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 NPBQ8NG41 125 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 ACER1Q8TDN7 264 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 OR5B2Q96R09 309 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 NAP1L3Q99457 506 aaPredicted RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 OR11A1Q9GZK7 315 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 CDC42EP4Q9H3Q1 356 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 TREM2Q9NZC2 230 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 GNPTGQ9UJJ9 305 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 NUDCQ9Y266 331 aa1□□□□□ -2.25
PDGFC-208ENST00000512711 YTHDF2Q9Y5A9 579 aaKnown RBP1□□□□□ -2.25
PDGFC-208ENST00000512711 FRMPD3Q5JV73 1810 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 MROH7-TTC4A0A0A0MT08 1334 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 ESYT2A0FGR8 921 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 KINO60870 393 aaKnown RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 ECI2O75521 394 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 CTDNEP1O95476 244 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 LGI1O95970 557 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 PLEKP08567 350 aaPredicted RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 ANXA4P09525 319 aaPredicted RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 H2AFXP16104 143 aaPredicted RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 HNF1AP20823 631 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 HSPA1LP34931 641 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 CYLC1P35663 651 aaPredicted RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 KRTAP6-3Q3LI67 103 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 LIPNQ5VXI9 398 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 CTRB2Q6GPI1 263 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 SCYL2Q6P3W7 929 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 WDR88Q6ZMY6 472 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 EXOC6Q8TAG9 804 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 SELENOMQ8WWX9 145 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 ARPC1AQ92747 370 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 GAL3ST1Q99999 423 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 SPATA16Q9BXB7 569 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 C2orf40Q9H1Z8 148 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 IFI27L2Q9H2X8 130 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 RPAP3Q9H6T3 665 aaPredicted RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms