RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ATRAID	Q6UW56	229 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	THADA	Q6YHU6	1953 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	PEX5L	Q8IYB4	626 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	OR4F17	Q8NGA8	305 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	TFB1M	Q8WVM0	346 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	FGF11	Q92914	225 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	CABS1	Q96KC9	395 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	CASD1	Q96PB1	797 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	OR4F4	Q96R69	305 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	DDX47	Q9H0S4	455 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	NTNG1	Q9Y2I2	539 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	DDX49	Q9Y6V7	483 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	VPS13C	Q709C8	3753 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	IGHV3-35	A0A0C4DH35	117 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895		E7ENQ6	273 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895		G3V3Y1	287 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	LCMT2	O60294	686 aa	Known RBP	4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	CXCL14	O95715	111 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	ECD	O95905	644 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	PNP	P00491	289 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	ALPI	P09923	528 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	GNS	P15586	552 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	TMOD1	P28289	359 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	CA8	P35219	290 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	CCL11	P51671	97 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	HNRNPF	P52597	415 aa	Known RBP	4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	ACTN3	Q08043	901 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	CD47	Q08722	323 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	ASAH1	Q13510	395 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	SERTAD2	Q14140	314 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	ZIC1	Q15915	447 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	ZNF79	Q15937	498 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	IGFBP7	Q16270	282 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	SPNS3	Q6ZMD2	512 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	DPY19L2P2	Q6ZN68	376 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	GET4	Q7L5D6	327 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895		Q8N7P7	452 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	TMEM45B	Q96B21	275 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	VNN3	Q9NY84	501 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	HMG20B	Q9P0W2	317 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	MTRR	Q9UBK8	725 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	KLHDC2	Q9Y2U9	406 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	KNSTRN	Q9Y448	316 aa		4.07	□□□□□ -1.76
LINC01088-208	ENST00000511895	TACC2	O95359	2948 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	CROCC	Q5TZA2	2017 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	NSD1	Q96L73	2696 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	ABHD2	P08910	425 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	PTPN4	P29074	926 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	RGR	P47804	291 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	ATXN3	P54252	364 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	CASP9	P55211	416 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	KRTAP12-2	P59991	146 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	SRP54	P61011	504 aa	Known RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	SST	P61278	116 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	NME3	Q13232	169 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	KARS	Q15046	597 aa	Known RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	HFE	Q30201	348 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	PAN3	Q58A45	887 aa	Known RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	DLEU7	Q6UYE1	221 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	VASH2	Q86V25	355 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	CNTN4	Q8IWV2	1026 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	FAM3C	Q92520	227 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	PHYHIPL	Q96FC7	376 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	SPATA13	Q96N96	652 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	NACA2	Q9H009	215 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	CARD9	Q9H257	536 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	IKZF5	Q9H5V7	419 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	ALG9	Q9H6U8	611 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	HOMER3	Q9NSC5	361 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	LHX3	Q9UBR4	397 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	MIOX	Q9UGB7	285 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	TRMT6	Q9UJA5	497 aa	Known RBP	4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	FKBP7	Q9Y680	259 aa		4.06	□□□□□ -1.76
LINC01088-208	ENST00000511895	LCT	P09848	1927 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	COL4A2	P08572	1712 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	HAS3	O00219	553 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	METAP1	P53582	386 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	MECOM	Q03112	1051 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	KLRC3	Q07444	240 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	OVGP1	Q12889	678 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	EIF2B1	Q14232	305 aa	Known RBP	4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	LASP1	Q14847	261 aa	Known RBP	4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	KIAA0040	Q15053	153 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	ETFRF1	Q6IPR1	90 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895		Q6ZS52	159 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	YRDC	Q86U90	279 aa	Known RBP	4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	SLC34A3	Q8N130	599 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	CENPS	Q8N2Z9	138 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	MSANTD4	Q8NCY6	345 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	TSPAN18	Q96SJ8	248 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	CWH43	Q9H720	699 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	VCPKMT	Q9H867	229 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	IL17C	Q9P0M4	197 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	NUDC	Q9Y266	331 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	DOCK6	Q96HP0	2047 aa		4.05	□□□□□ -1.76
LINC01088-208	ENST00000511895	ANK2	Q01484	3957 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 661.6 ms