RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 SESN3P58005 492 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 TFF3Q07654 80 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 MERTKQ12866 999 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 KLF10Q13118 480 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
PTCD2-209ENST00000511752 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 RUNDC3AQ59EK9 446 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 C3orf33Q6P1S2 294 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 DLEU7Q6UYE1 221 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 MEX3BQ6ZN04 569 aaKnown RBP11.22□□□□□ -0.61
PTCD2-209ENST00000511752 RETREG3Q86VR2 466 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF440Q8IYI8 595 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 GCNT2Q8N0V5 402 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 ATP6V1C2Q8NEY4 427 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 FNDC9Q8TBE3 224 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 C10orf82Q8WW14 230 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 FIG4Q92562 907 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 CNOT9Q92600 299 aaKnown RBP11.22□□□□□ -0.61
PTCD2-209ENST00000511752 MAL2Q969L2 176 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 REXO5Q96IC2 774 aaKnown RBP11.22□□□□□ -0.61
PTCD2-209ENST00000511752 SPOCK3Q9BQ16 436 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 ENKD1Q9H0I2 346 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 BCL2L10Q9HD36 194 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 SAR1AQ9NR31 198 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 ACER3Q9NUN7 267 aa11.22□□□□□ -0.61
PTCD2-209ENST00000511752 DNAJB12Q9NXW2 375 aaKnown RBP11.22□□□□□ -0.61
PTCD2-209ENST00000511752 MED12LQ86YW9 2145 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CFAP73A6NFT4 308 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 BBIP1A8MTZ0 92 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 EEF1E1-BLOC1S5C9J1V9 151 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 SLC22A2O15244 555 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 EEF1E1O43324 174 aaKnown RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 EFNA2O43921 213 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CXCL13O43927 109 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CCDC22O60826 627 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 BCAS1O75363 584 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 PGM3O95394 542 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ETS2P15036 469 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 SLC7A1P30825 629 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 PEX19P40855 299 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 APOBEC1P41238 236 aaKnown RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 HTR3AP46098 478 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CARD18P57730 90 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 FOXF2Q12947 444 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CYLC2Q14093 348 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 TMEM176BQ3YBM2 270 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF311Q5JNZ3 666 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 RNF220Q5VTB9 566 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 REEP3Q6NUK4 255 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF836Q6ZNA1 936 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 PLEKHM3Q6ZWE6 761 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 GRINAQ7Z429 371 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 VRK2Q86Y07 508 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 KRT73Q86Y46 540 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 NFKBIDQ8NI38 313 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF524Q96C55 264 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ADGRG7Q96K78 797 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ANKRD27Q96NW4 1050 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CPPED1Q9BRF8 314 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 SPATA5L1Q9BVQ7 753 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 SPATA9Q9BWV2 254 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 NSRP1Q9H0G5 558 aaKnown RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 PIGMQ9H3S5 423 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 IKZF5Q9H5V7 419 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 TMEM38AQ9H6F2 299 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 RNF122Q9H9V4 155 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 FOXD3Q9UJU5 478 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 PRDM4Q9UKN5 801 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF443Q9Y2A4 671 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 SPIN1Q9Y657 262 aaPredicted RBP11.21□□□□□ -0.61
PTCD2-209ENST00000511752 CAPN7Q9Y6W3 813 aa11.21□□□□□ -0.61
PTCD2-209ENST00000511752 FLNBO75369 2602 aaKnown RBP11.21□□□□□ -0.62
PTCD2-209ENST00000511752 UTP20O75691 2785 aaKnown RBP11.2□□□□□ -0.62
PTCD2-209ENST00000511752 A0A1W2PNV4 684 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 CDHR4A6H8M9 788 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 FAAHO00519 579 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 FBP2O00757 339 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 PLGP00747 810 aaPredicted RBP11.2□□□□□ -0.62
PTCD2-209ENST00000511752 PABPC4LP0CB38 370 aaKnown RBP11.2□□□□□ -0.62
PTCD2-209ENST00000511752 IGFBP2P18065 325 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 SLC6A2P23975 617 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 FKBP2P26885 142 aaKnown RBP11.2□□□□□ -0.62
PTCD2-209ENST00000511752 SHC1P29353 583 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 UQCRC1P31930 480 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 IDH2P48735 452 aaKnown RBP11.2□□□□□ -0.62
PTCD2-209ENST00000511752 DLX5P56178 289 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 CDK6Q00534 326 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 PLAURQ03405 335 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 EPS8Q12929 822 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 SCARB2Q14108 478 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 CYP51A1Q16850 503 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 TRMT5Q32P41 509 aaKnown RBP11.2□□□□□ -0.62
PTCD2-209ENST00000511752 FBXL19-AS1Q494R0 122 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 COQ5Q5HYK3 327 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 GTF2IRD2BQ6EKJ0 949 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 ZNF550Q7Z398 422 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 SPATA21Q7Z572 469 aa11.2□□□□□ -0.62
PTCD2-209ENST00000511752 GTF2IRD2Q86UP8 949 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms