RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 UBTFL6P0CB48 400 aaPredicted RBP15.53■□□□□ 0.08
CLDND1-221ENST00000510541 IL11P20809 199 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 HTR1EP28566 365 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 GZMMP51124 257 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 SUCLG1P53597 346 aaKnown RBP15.53■□□□□ 0.08
CLDND1-221ENST00000510541 SESN3P58005 492 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 EPS8Q12929 822 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 VEZF1Q14119 521 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 FAM91A1Q658Y4 838 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 ARPINQ7Z6K5 226 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 CALHM3Q86XJ0 350 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 ZNF614Q8N883 585 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 FBXO27Q8NI29 283 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 KLHL15Q96M94 604 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 ZNF607Q96SK3 696 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 THUMPD3Q9BV44 507 aaKnown RBP15.53■□□□□ 0.08
CLDND1-221ENST00000510541 ADAM19Q9H013 955 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 PIGMQ9H3S5 423 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 KCNJ16Q9NPI9 418 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 TIGARQ9NQ88 270 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 SERINC1Q9NRX5 453 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 ALKBH4Q9NXW9 302 aa15.53■□□□□ 0.08
CLDND1-221ENST00000510541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.53■□□□□ 0.08
CLDND1-221ENST00000510541 SPIN1Q9Y657 262 aaPredicted RBP15.53■□□□□ 0.08
CLDND1-221ENST00000510541 INTS1Q8N201 2190 aaKnown RBP15.53■□□□□ 0.08
CLDND1-221ENST00000510541 CFAP73A6NFT4 308 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 NDUFAB1O14561 156 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 ZNF208O43345 1280 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 SERPINB7O75635 380 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 NUDT14O95848 222 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 NUDT7P0C024 238 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 ACAA2P42765 397 aaKnown RBP15.52■□□□□ 0.08
CLDND1-221ENST00000510541 SLC1A3P43003 542 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 ZNF136P52737 540 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 SEC24CP53992 1094 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CLDN20P56880 219 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 FOXF1Q12946 379 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 INTS11Q5TA45 600 aaKnown RBP15.52■□□□□ 0.08
CLDND1-221ENST00000510541 NANOGP8Q6NSW7 305 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 PLEKHM3Q6ZWE6 761 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CCDC80Q76M96 950 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CPLX4Q7Z7G2 160 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 PTOV1Q86YD1 416 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 LILRA2Q8N149 483 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 LSMEM1Q8N8F7 131 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 TNIP2Q8NFZ5 429 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 OR2V1Q8NHB1 315 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CNOT9Q92600 299 aaKnown RBP15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CPNE4Q96A23 557 aaPredicted RBP15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CMTM5Q96DZ9 223 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 TRIB1Q96RU8 372 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 ELAC2Q9BQ52 826 aaKnown RBP15.52■□□□□ 0.08
CLDND1-221ENST00000510541 KLHDC3Q9BQ90 382 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 NANOGQ9H9S0 305 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 C12orf10Q9HB07 376 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 ZNF443Q9Y2A4 671 aaPredicted RBP15.52■□□□□ 0.08
CLDND1-221ENST00000510541 CHST2Q9Y4C5 530 aa15.52■□□□□ 0.08
CLDND1-221ENST00000510541 SLC22A20A6NK97 555 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 C5orf58C9J3I9 102 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 H3BML4 177 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 SYT5O00445 386 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 MRASO14807 208 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 RAC3P60763 192 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 SCARB2Q14108 478 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 TOMM34Q15785 309 aaPredicted RBP15.51■□□□□ 0.07
CLDND1-221ENST00000510541 MMEL1Q495T6 779 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 REP15Q6BDI9 236 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 GTF2IRD2BQ6EKJ0 949 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 ERICH5Q6P6B1 374 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 GTF2IRD2Q86UP8 949 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 MED12LQ86YW9 2145 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 C10orf111Q8N326 155 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 SLC43A2Q8N370 569 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 C9orf106Q8NAJ2 232 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 NAXEQ8NCW5 288 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 OR10Q1Q8NGQ4 319 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 RASSF5Q8WWW0 418 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 LRRC46Q96FV0 321 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 NPAS1Q99742 590 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 HOPXQ9BPY8 73 aaPredicted RBP15.51■□□□□ 0.07
CLDND1-221ENST00000510541 GPATCH1Q9BRR8 931 aaKnown RBP15.51■□□□□ 0.07
CLDND1-221ENST00000510541 TACO1Q9BSH4 297 aaKnown RBP15.51■□□□□ 0.07
CLDND1-221ENST00000510541 QRSL1Q9H0R6 528 aaKnown RBP15.51■□□□□ 0.07
CLDND1-221ENST00000510541 MCTS1Q9ULC4 181 aaKnown RBP15.51■□□□□ 0.07
CLDND1-221ENST00000510541 ANGPT4Q9Y264 503 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 TRAPPC4Q9Y296 219 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 HDGFL3Q9Y3E1 203 aa15.51■□□□□ 0.07
CLDND1-221ENST00000510541 A0A0J9YW62 118 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 ADAM11O75078 769 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 FZD7O75084 574 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 TMIGD3P0DMS9 266 aaPredicted RBP15.5■□□□□ 0.07
CLDND1-221ENST00000510541 PCGF2P35227 344 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 CDSNQ15517 529 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 ZNF311Q5JNZ3 666 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 C8orf82Q6P1X6 216 aaPredicted RBP15.5■□□□□ 0.07
CLDND1-221ENST00000510541 C6orf89Q6UWU4 347 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 ZNF836Q6ZNA1 936 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 OLIG3Q7RTU3 272 aa15.5■□□□□ 0.07
CLDND1-221ENST00000510541 PATL1Q86TB9 770 aaKnown RBP15.5■□□□□ 0.07
CLDND1-221ENST00000510541 SNX32Q86XE0 403 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms