RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 NPIPB9F8W1W9 429 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 DSCR3O14972 297 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 UTS2O95399 124 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 GAS1P54826 345 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 PRKCDQ05655 676 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 MADCAM1Q13477 382 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 C1DQ13901 141 aaKnown RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 ZNF829Q3KNS6 432 aaPredicted RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 HLA-DQA1Q5Y7H0 255 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 TMEM71Q6P5X7 295 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 ZNF613Q6PF04 617 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 SECISBP2Q96T21 854 aaKnown RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 SMAD5Q99717 465 aaKnown RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 TM9SF2Q99805 663 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 PRRG3Q9BZD7 231 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 FN3KQ9H479 309 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 ZNF768Q9H5H4 540 aaKnown RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 ADAM18Q9Y3Q7 739 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 SCDO00767 359 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
PHF3-209ENST00000509330 NUDT14O95848 222 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 BMP4P12644 408 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 DAB2P98082 770 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 ZXDAP98168 799 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 ZNF141Q15928 474 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 AADACL4Q5VUY2 407 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 OR5M10Q6IEU7 315 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 WDR74Q6RFH5 385 aaPredicted RBP13.66□□□□□ -0.22
PHF3-209ENST00000509330 STT3BQ8TCJ2 826 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 BORCS5Q969J3 196 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 TRIM2Q9C040 744 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 DIMT1Q9UNQ2 313 aaKnown RBP13.66□□□□□ -0.22
PHF3-209ENST00000509330 IGKV3D-11A0A0A0MRZ8 115 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 C4orf47A7E2U8 309 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 BHLHE40O14503 412 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 SCO2O43819 266 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 SCRG1O75711 98 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 WISP1O95388 367 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 LALBAP00709 142 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 ITPKBP27987 946 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 FOXK2Q01167 660 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 CRMP1Q14194 572 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 INSL4Q14641 139 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 INAQ16352 499 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 MARCH3Q86UD3 253 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 MAML2Q8IZL2 1156 aaPredicted RBP13.66□□□□□ -0.22
PHF3-209ENST00000509330 SDR9C7Q8NEX9 313 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 OR4C6Q8NH72 309 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 LCORQ96JN0 433 aaPredicted RBP13.66□□□□□ -0.22
PHF3-209ENST00000509330 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 OR1F2PQ96R84 312 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 OSGIN1Q9UJX0 560 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 PCDHGA3Q9Y5H0 932 aa13.66□□□□□ -0.22
PHF3-209ENST00000509330 IGHV5-10-1A0A0J9YXX1 117 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 TCRBV16S1A1N1A0A5B0 115 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 BLACEA4D250 179 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 KDM4EB2RXH2 506 aaPredicted RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 SCG5P05408 212 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 TSPAN19P0C672 248 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 IL12BP29460 328 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 PSMD7P51665 324 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 TRIM61Q5EBN2 209 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 ZNF550Q7Z398 422 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 ZNF563Q8TA94 476 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 C8orf44Q96CB5 159 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 KLHL1Q9NR64 748 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 C14orf105Q9NVL8 296 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 MMACHCQ9Y4U1 282 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 MPDZO75970 2070 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 HCRTR2O43614 444 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 FMO6PO60774 539 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 IGKV3-11P04433 115 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 LIMS3P0CW19 117 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 LIMS4P0CW20 117 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 EBPQ15125 230 aaKnown RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 ELAVL1Q15717 326 aaKnown RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 KLHL22Q53GT1 634 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 ULK3Q6PHR2 472 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 COX15Q7KZN9 410 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 PRSS42Q7Z5A4 293 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 PROKR2Q8NFJ6 384 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 PMEPA1Q969W9 287 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 OCIAD1Q9NX40 245 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 SLC35F4A4IF30 521 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 UBL4AP11441 157 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 PAICSP22234 425 aaKnown RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 RPL4P36578 427 aaKnown RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 RPS25P62851 125 aaKnown RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 PLCXD2Q0VAA5 305 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 RAB40BQ12829 278 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 TOMM34Q15785 309 aaPredicted RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 LCN10Q6JVE6 187 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 MRGPREQ86SM8 312 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 PHC2Q8IXK0 858 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms