RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 HTR3AP46098 478 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 SLC1A6P48664 564 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 PTH2RP49190 550 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 KHKP50053 298 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 MAP2K6P52564 334 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 RASGEF1BQ0VAM2 473 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 SKP2Q13309 424 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 GNA13Q14344 377 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 PDK3Q15120 406 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 PDCD2Q16342 344 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 TIGD2Q4W5G0 525 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 C1QTNF12Q5T7M4 302 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 OR4F3Q6IEY1 312 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 OR5D16Q8NGK9 328 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 GTPBP3Q969Y2 492 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 TRMT61AQ96FX7 289 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 PERPQ96FX8 193 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 Q96MF0 132 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 THUMPD3Q9BV44 507 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 SRXN1Q9BYN0 137 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 ACER3Q9NUN7 267 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 HAO1Q9UJM8 370 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 LIPT1Q9Y234 373 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 WDR45Q9Y484 360 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
CCHCR1-227ENST00000508852 NSD1Q96L73 2696 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 NPIPA5A0A0B4J1W7 369 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 NPIPA7E9PJI5 369 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 GPR171O14626 319 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 EFNA2O43921 213 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 KIAA0513O60268 411 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 UGT2B17O75795 530 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 CYP7B1O75881 506 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 NPIPA8P0DM63 369 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 UQCRBP14927 111 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 CHI3L1P36222 383 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 OR3A2P47893 321 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 RPS4XP62701 263 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 MERTKQ12866 999 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 STX3Q13277 289 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 TMPPEQ6ZT21 453 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 CMIPQ8IY22 773 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF781Q8N8C0 355 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 ATP6V1C2Q8NEY4 427 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 XAGE5Q8WWM1 108 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 MUCL1Q96DR8 90 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 NEURL3Q96EH8 262 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 RADILQ96JH8 1075 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 OR5B2Q96R09 309 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 OR51I1Q9H343 314 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 COQ10BQ9H8M1 238 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 EXOSC3Q9NQT5 275 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 MKLN1Q9UL63 735 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 HDGFL3Q9Y3E1 203 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 ABCA2Q9BZC7 2435 aa12.09□□□□□ -0.47
CCHCR1-227ENST00000508852 WDR91A4D1P6 747 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 ESPNB1AK53 854 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 E9PBE3 544 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 H7C1Q1 480 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 SULT2B1O00204 365 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 OIP5O43482 229 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 ADAP00813 363 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 DHRS4L1P0CG22 281 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 CREB1P16220 341 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 SHC1P29353 583 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 S100A3P33764 101 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 SESN3P58005 492 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF844Q08AG5 666 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 CAPRIN1Q14444 709 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 CASP8Q14790 479 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 TOMM34Q15785 309 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 SYT14P1Q58G82 188 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 NCMAPQ5T1S8 102 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 SAXO2Q658L1 398 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 BHLHA15Q7RTS1 189 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 NUFIP2Q7Z417 695 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 GRINAQ7Z429 371 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 SPATA19Q7Z5L4 167 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 MTDHQ86UE4 582 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 CLECL1Q8IZS7 167 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF619Q8N2I2 560 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 AKAP1Q92667 903 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 ZBTB18Q99592 522 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 MEAF6Q9HAF1 191 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms