RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SLC5A11Q8WWX8 675 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 RLN3Q8WXF3 142 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 FAM122AQ96E09 287 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 MS4A14Q96JA4 679 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 C7orf34Q96L11 122 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 TGM7Q96PF1 710 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 IL4I1Q96RQ9 567 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 TBX15Q96SF7 602 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SPATA16Q9BXB7 569 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 YTHDF1Q9BYJ9 559 aaKnown RBP2.45□□□□□ -2.02
LSM6-205ENST00000507449 SRXN1Q9BYN0 137 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 PLSCR3Q9NRY6 295 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 UFSP2Q9NUQ7 469 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SMOXQ9NWM0 555 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 AIPL1Q9NZN9 384 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 B4GALT7Q9UBV7 327 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 WARS2Q9UGM6 360 aaKnown RBP2.45□□□□□ -2.02
LSM6-205ENST00000507449 NPIPA1Q9UND3 350 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 MAD1L1Q9Y6D9 718 aa2.45□□□□□ -2.02
LSM6-205ENST00000507449 SMIM28A0A1B0GU29 152 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 KIF2AO00139 706 aaPredicted RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 SNNO75324 88 aaPredicted RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 LYPLA1O75608 230 aaPredicted RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 GNA14O95837 355 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 TIMP1P01033 207 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 IGHV3-48P01763 117 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 IGHG4P01861 327 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 ALOX5P09917 674 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 PNMTP11086 282 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 ZNF19P17023 458 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 POLR2EP19388 210 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 CALB2P22676 271 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 GLRA2P23416 452 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 ZBTB25P24278 435 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 NMT1P30419 496 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 EPHX2P34913 555 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 LEPP41159 167 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 CASP4P49662 377 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 P2RY4P51582 365 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 GBX2P52951 348 aaPredicted RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 RIPK4P57078 832 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 RPS8P62241 208 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 MAP2K1Q02750 393 aaPredicted RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 IL24Q13007 206 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 CHIT1Q13231 466 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 GPM6BQ13491 265 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 CFAP157Q5JU67 520 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 GPRC6AQ5T6X5 926 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 VSTM4Q8IW00 320 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 C11orf53Q8IXP5 236 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 OR2L13Q8N349 312 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 SVOPLQ8N434 492 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 DHRSXQ8N5I4 330 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 OR56B4Q8NH76 319 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 TRMT10AQ8TBZ6 339 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 CNOT6LQ96LI5 555 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 TECTBQ96PL2 329 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 KLHDC3Q9BQ90 382 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 NIPSNAP3BQ9BS92 247 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 NMUR2Q9GZQ4 415 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 NAT10Q9H0A0 1025 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 VCPKMTQ9H867 229 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 LCMT1Q9UIC8 334 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 PTBP2Q9UKA9 531 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 UBQLN1Q9UMX0 589 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 MRPS7Q9Y2R9 242 aaKnown RBP2.44□□□□□ -2.02
LSM6-205ENST00000507449 POLDIP2Q9Y2S7 368 aa2.44□□□□□ -2.02
LSM6-205ENST00000507449 KIF16BQ96L93 1317 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 PTCH1Q13635 1447 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 AGRNO00468 2067 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 ADAMTS9Q9P2N4 1935 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 IGHV7-81A0A0B4J1V7 117 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 A0A0G2JRQ6 117 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 GPR89AB7ZAQ6 455 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 TPST2O60704 377 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 MTX2O75431 263 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 UGT2B17O75795 530 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 SLITRK3O94933 977 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 LRATO95237 230 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 LYPD3O95274 346 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 LY6G6DO95868 133 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 GPR89BP0CG08 455 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 PSMB1P20618 241 aaKnown RBP2.43□□□□□ -2.02
LSM6-205ENST00000507449 HLCSP50747 726 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 ACTR1AP61163 376 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 SPATA46Q5T0L3 261 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 FHL5Q5TD97 284 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 TPGS2Q68CL5 300 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 TFAP2EQ6VUC0 442 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 HSD17B13Q7Z5P4 300 aaPredicted RBP2.43□□□□□ -2.02
LSM6-205ENST00000507449 PPP1R27Q86WC6 154 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 FGGYQ96C11 551 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 NUS1Q96E22 293 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 PSKH2Q96QS6 385 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 MAPKAP1Q9BPZ7 522 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 SLC35A5Q9BS91 424 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 MAGT1Q9H0U3 335 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 LRRN3Q9H3W5 708 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 EHD1Q9H4M9 534 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 IL17CQ9P0M4 197 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms