RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ANKRD27Q96NW4 1050 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 AHSPQ9NZD4 102 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 C1RLQ9NZP8 487 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 EMC3Q9P0I2 261 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 SENP1Q9P0U3 644 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 ASH2LQ9UBL3 628 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 ANGPTL3Q9Y5C1 460 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 PCDHGB5Q9Y5G0 923 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 STAB2Q8WWQ8 2551 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 C5orf63A6NC05 138 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 OR6C65A6NJZ3 312 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 MIF4GDA9UHW6 222 aaKnown RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 HOXA3O43365 443 aaPredicted RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 CDC14BO60729 498 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 MFAP3LO75121 409 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 PPP1R3DO95685 299 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 TPM3P06753 285 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 HPGDP15428 266 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 TIA1P31483 386 aaKnown RBP eCLIP6.18□□□□□ -1.42
VCAN-207ENST00000507162 NTF4P34130 210 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 GABRA3P34903 492 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 GPC1P35052 558 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 RAD52P43351 418 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 PRIM2P49643 509 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 ATP4BP51164 291 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 SEC24CP53992 1094 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 PSMD4P55036 377 aaKnown RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 TAS2R39P59534 338 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 RELBQ01201 579 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 NAAAQ02083 359 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 HGFACQ04756 655 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 E2F2Q14209 437 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 CRYMQ14894 314 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 KLF17Q5JT82 389 aaPredicted RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 PAGE2Q7Z2X7 111 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 C17orf78Q8N4C9 275 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 PLPP7Q8NBV4 271 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 GLB1L3Q8NCI6 653 aaPredicted RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 OR7G2Q8NG99 324 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 OR4C3Q8NH37 302 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 B4GALNT2Q8NHY0 566 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 ZNF675Q8TD23 568 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 POP5Q969H6 163 aaKnown RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 EXOSC8Q96B26 276 aaKnown RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 TM4SF18Q96CE8 201 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 KTI12Q96EK9 354 aaPredicted RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 ZNF681Q96N22 645 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 OR5B2Q96R09 309 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 SERPINI1Q99574 410 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 KATNB1Q9BVA0 655 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 ZNF416Q9BWM5 594 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 MRPL1Q9BYD6 325 aaKnown RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 XAB2Q9HCS7 855 aaKnown RBP6.18□□□□□ -1.42
VCAN-207ENST00000507162 Q9N2J8 555 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 OPTCQ9UBM4 332 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 AUP1Q9Y679 476 aa6.18□□□□□ -1.42
VCAN-207ENST00000507162 HYDINQ4G0P3 5121 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 MDFIC2A0A1B0GVS7 189 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 GXYLT2A0PJZ3 443 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 K7EPI3 171 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 SYNGR3O43761 229 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 DEAF1O75398 565 aaPredicted RBP6.17□□□□□ -1.42
VCAN-207ENST00000507162 ERLIN1O75477 346 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 NDUFA7O95182 113 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 OPN1MWP04001 364 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 LTA4HP09960 611 aaKnown RBP6.17□□□□□ -1.42
VCAN-207ENST00000507162 LINGO3P0C6S8 592 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 CECR9P0C854 216 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 OPN1MW2P0DN77 364 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 OPN1MW3P0DN78 364 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 PGAM1P18669 254 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 ALDH3B1P43353 468 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 TUBA1BP68363 451 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 TUBA4AP68366 448 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 PDCD1Q15116 288 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 OR4D1Q15615 310 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 SGO1Q5FBB7 561 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 CDKL4Q5MAI5 379 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 OTUD3Q5T2D3 398 aaPredicted RBP6.17□□□□□ -1.42
VCAN-207ENST00000507162 LIPJQ5W064 366 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 CASP12Q6UXS9 341 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 TUBA1AQ71U36 451 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 ZNF527Q8NB42 609 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 NUP37Q8NFH4 326 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 ERP27Q96DN0 273 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 ARL5BQ96KC2 179 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 BBS4Q96RK4 519 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 FAIM2Q9BWQ8 316 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 MS4A5Q9H3V2 200 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 SLC7A10Q9NS82 523 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 EGFL7Q9UHF1 273 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 DCTN4Q9UJW0 460 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 CMAHPQ9Y471 501 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
VCAN-207ENST00000507162 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 FAM95CA0A1B0GW59 222 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 ALG1L2C9J202 215 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 H0YIV9 168 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 M0R233 179 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms