RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RAB40AQ8WXH6 277 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 FANCFQ9NPI8 374 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 EQTNQ9NQ60 294 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 COA4Q9NYJ1 87 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 HAO2Q9NYQ3 351 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 FLVCR2Q9UPI3 526 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 FAM86C2PA6NEL3 165 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 OR2AG2A6NM03 316 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 F5H5P2 479 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 PLPP1O14494 284 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 CDC123O75794 336 aaPredicted RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 FCER2P06734 321 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 UCHL1P09936 223 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 SNRPBP14678 240 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 NT5EP21589 574 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 XPAP23025 273 aaPredicted RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 PRKAR1BP31321 381 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 RAB13P51153 203 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 SLC3A1Q07837 685 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 LGALS3BPQ08380 585 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 RNASE12Q5GAN4 147 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 APOOLQ6UXV4 268 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 RFLNAQ6ZTI6 216 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 HTR3DQ70Z44 454 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 TRMT11Q7Z4G4 463 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 OR8K3Q8NH51 312 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 PHYHIPLQ96FC7 376 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 PIGMQ9H3S5 423 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 AUNIPQ9H7T9 357 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 SEMA4GQ9NTN9 838 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 NTMQ9P121 344 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 CFAP97Q9P2B7 532 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 A0A0D9SG52 128 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ABHD14A-ACY1A0A1B0GW23 586 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ZNF879B4DU55 563 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ACOT7O00154 380 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 MPGP29372 298 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 VIPR1P32241 457 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 BSGP35613 385 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 MEOX2P50222 304 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 SMAD3P84022 425 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 DEFA5Q01523 94 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 GAS6Q14393 721 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 GRM7Q14831 915 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ARSIQ5FYB1 569 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 FUT10Q6P4F1 479 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 PSRC1Q6PGN9 363 aaPredicted RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ATRAIDQ6UW56 229 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 RSPO2Q6UXX9 243 aaPredicted RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 Q6ZNB5 142 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 OR1M1Q8NGA1 313 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 OR10H4Q8NGA5 316 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 WFDC5Q8TCV5 224 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 VOPP1Q96AW1 172 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ZNF689Q96CS4 500 aaPredicted RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 SEC22CQ9BRL7 303 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 MS4A8Q9BY19 250 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 UBQLN3Q9H347 655 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 EXOSC3Q9NQT5 275 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 ZCCHC3Q9NUD5 404 aaKnown RBP14.75□□□□□ -0.05
SCLT1-208ENST00000506368 RASL12Q9NYN1 266 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 TAS2R10Q9NYW0 307 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
SCLT1-208ENST00000506368 EYSQ5T1H1 3165 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 TMEM202A6NGA9 273 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 OGG1O15527 345 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 MTX2O75431 263 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 KDM4BO94953 1096 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 CHRM4P08173 479 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 PREPP48147 710 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 HFEQ30201 348 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 FAM27D1Q5T7N8 215 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 PLBD1Q6P4A8 553 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 PAQR7Q86WK9 346 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 FAM129CQ86XR2 697 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 MMP21Q8N119 569 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 CRIPAKQ8N1N5 446 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 SVBPQ8N300 66 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 TMEM99Q8N816 258 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 OR56A1Q8NGH5 318 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 FIBINQ8TAL6 211 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 ST8SIA2Q92186 375 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 ART5Q96L15 291 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 PELI2Q9HAT8 420 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 CACYBPQ9HB71 228 aaKnown RBP14.74□□□□□ -0.05
SCLT1-208ENST00000506368 NRIP3Q9NQ35 241 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 TDP1Q9NUW8 608 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 CPNE7Q9UBL6 633 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 GPN3Q9UHW5 284 aaPredicted RBP14.74□□□□□ -0.05
SCLT1-208ENST00000506368 HS3ST2Q9Y278 367 aa14.74□□□□□ -0.05
SCLT1-208ENST00000506368 RAB19A4D1S5 217 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 POM121CA8CG34 1229 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 RAD1O60671 282 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 CBX7O95931 251 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 BMP7P18075 431 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 AKR1D1P51857 326 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 ACTA2P62736 377 aa14.73□□□□□ -0.05
SCLT1-208ENST00000506368 ACTG2P63267 376 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms