RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 SSR3Q9UNL2 185 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 DMDP11532 3685 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 A0A1W2PRU2 124 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 ARPC3O15145 178 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 ARHGEF9O43307 516 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 ITGA10O75578 1167 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 HPXP02790 462 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 GIPP09681 153 aaPredicted RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 APEHP13798 732 aaKnown RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 NAT1P18440 290 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 S100A5P33763 92 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 CCT3P49368 545 aaKnown RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 GPR143P51810 404 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 PIN1Q13526 163 aaPredicted RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 NAE1Q13564 534 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 EXOSC2Q13868 293 aaKnown RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 UBE2NLQ5JXB2 153 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 PRAMEF14Q5SWL7 426 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 PRAMEF13Q5VWM6 474 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 RPL13AP3Q6NVV1 102 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 ZNF613Q6PF04 617 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 NANOGNBQ7Z5D8 188 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 NPEPL1Q8NDH3 523 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 OR4D9Q8NGE8 314 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 CAPSLQ8WWF8 208 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 CNOT9Q92600 299 aaKnown RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 OSTF1Q92882 214 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 GTPBP3Q969Y2 492 aaKnown RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 ASB16Q96NS5 453 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 SPATA5L1Q9BVQ7 753 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 ATG10Q9H0Y0 220 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 SLC35C2Q9NQQ7 365 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 C20orf141Q9NUB4 165 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 KIF17Q9P2E2 1029 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 SCP2D1Q9UJQ7 156 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 ZFR2Q9UPR6 939 aaKnown RBP5.87□□□□□ -1.47
COPB2-204ENST00000504295 PCNX3Q9H6A9 2034 aa5.87□□□□□ -1.47
COPB2-204ENST00000504295 SLC22A23A1A5C7 686 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 GSAPA4D1B5 854 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 OTOL1A6NHN0 477 aaPredicted RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 PRAMEF26H0Y7S4 382 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 SLC28A2O43868 658 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 BRINP1O60477 761 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 ZNF254O75437 659 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 GATBO75879 557 aaKnown RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 AIFM1O95831 613 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 DLGAP3O95886 979 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 TCRBP04435 133 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 HEXAP06865 529 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 ICAM2P13598 275 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 VAMP1P23763 118 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 RAB25P57735 213 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 ZXDAP98168 799 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 PRDX1Q06830 199 aaKnown RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 GANABQ14697 944 aaKnown RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 PABPC1L2AQ5JQF8 200 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 SLC35D3Q5M8T2 416 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 P3H2Q8IVL5 708 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 KCT2Q8NC54 265 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 OR56A1Q8NGH5 318 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 WFIKKN2Q8TEU8 576 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 CDS1Q92903 461 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 TPD52L3Q96J77 140 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 PRRX2Q99811 253 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 C17orf62Q9BQA9 187 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 AMBNQ9NP70 447 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 C11orf16Q9NQ32 467 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 TIGARQ9NQ88 270 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 SEMA3GQ9NS98 782 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 CUTCQ9NTM9 273 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 HCFC1R1Q9NWW0 138 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 DNAJB12Q9NXW2 375 aaKnown RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 PTGFRNQ9P2B2 879 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 FBXL21Q9UKT6 434 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 C19orf53Q9UNZ5 99 aaPredicted RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 ENTPD2Q9Y5L3 495 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 CENPXA8MT69 81 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 TGFBR3LH3BV60 316 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 GNGT2O14610 69 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 FABP7O15540 132 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 PRAF2O60831 178 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 SLC2A10O95528 541 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 KLK1P06870 262 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 FHP07954 510 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 SBK2P0C263 348 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 SLC25A4P12235 298 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 ALOX12P18054 663 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 CLK1P49759 484 aaKnown RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 GBX2P52951 348 aaPredicted RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 POLR2LP62875 67 aaKnown RBP5.86□□□□□ -1.47
COPB2-204ENST00000504295 SIGLEC14Q08ET2 396 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 CNTN1Q12860 1018 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 TRAM2Q15035 370 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 GRK1Q15835 563 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 FAM205BPQ63HN1 556 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 FCRL6Q6DN72 434 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 PWWP2BQ6NUJ5 590 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 Q6ZTK2 550 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 CDC20BQ86Y33 519 aa5.86□□□□□ -1.47
COPB2-204ENST00000504295 MCATQ8IVS2 390 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms