RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 FAM53BQ14153 422 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF613Q6PF04 617 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 RPTNQ6XPR3 784 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 TRILQ7L0X0 811 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 CDK20Q8IZL9 346 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 RFLNBQ8N5W9 214 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF655Q8N720 491 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 C17orf47Q8NEP4 570 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 OR9A4Q8NGU2 314 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 GPBAR1Q8TDU6 330 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 HOXB13Q92826 284 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 ZC3HAV1LQ96H79 300 aaKnown RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PEX11GQ96HA9 241 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 RNF170Q96K19 258 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF559Q9BR84 538 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 TMEM27Q9HBJ8 222 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 FAM60AQ9NP50 221 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 C14orf105Q9NVL8 296 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 RBFOX1Q9NWB1 397 aaKnown RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 SLC35A3Q9Y2D2 325 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 BOLA1Q9Y3E2 137 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PCDHGB7Q9Y5F8 929 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PIAS3Q9Y6X2 628 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 A0A0G2JMP0 313 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 A0A0X1KG70 313 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 TCRBV21S2A2A0A5A6 115 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 RIIAD1A6NNX1 92 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 CENPXA8MT69 81 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 FAM25AB3EWG3 89 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 FAM25CB3EWG5 89 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 FAM25GB3EWG6 89 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 HRKO00198 91 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 LYRM1O43325 122 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 SBK2P0C263 348 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PTBP1P26599 531 aaKnown RBP eCLIP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 AKT2P31751 481 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 THBS2P35442 1172 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 RAB38P57729 211 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 OR10A3P58181 314 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 YPEL5P62699 121 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 MRPS15P82914 257 aaKnown RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 SLC3A1Q07837 685 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 TATDN3Q17R31 274 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 HBMQ6B0K9 141 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PLET1Q6UQ28 207 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 PAMR1Q6UXH9 720 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 SSX6Q7RTT6 188 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 OR4M2Q8NGB6 313 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 UPRTQ96BW1 309 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 AHCYL2Q96HN2 611 aaKnown RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 C4orf36Q96KX1 117 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 TNFRSF13CQ96RJ3 184 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 KCNJ15Q99712 375 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 GDF15Q99988 308 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 CCDC3Q9BQI4 270 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 NDC1Q9BTX1 674 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF426Q9BUY5 554 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 MCCC2Q9HCC0 563 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 DNAJB12Q9NXW2 375 aaKnown RBP9.1□□□□□ -0.95
CLIP1-204ENST00000501271 EXTL2Q9UBQ6 330 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 DTX4Q9Y2E6 619 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 CLCA3PQ9Y6N3 262 aa9.1□□□□□ -0.95
CLIP1-204ENST00000501271 BRWD1Q9NSI6 2320 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 FAM47E-STBD1D6RA91 191 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 TGFBR3LH3BV60 316 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 PLPP2O43688 288 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 OR10H2O60403 315 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 SLC19A2O60779 497 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 MT-ND5P03915 603 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 PRKAR1AP10644 381 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 ST6GAL1P15907 406 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF3P17036 446 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 TYRP1P17643 537 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 GABRG2P18507 467 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 S1PR1P21453 382 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 ACAA2P42765 397 aaKnown RBP9.09□□□□□ -0.95
CLIP1-204ENST00000501271 OR12D2P58182 307 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 CD83Q01151 205 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 MANEAQ5SRI9 462 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 FAAH2Q6GMR7 532 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 OAFQ86UD1 273 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 DTX3Q8N9I9 347 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 OR4C6Q8NH72 309 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 SMPDL3BQ92485 455 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 PGLYRP3Q96LB9 341 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 TTTY10Q9BZA0 68 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 FOLH1BQ9HBA9 442 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 POLE3Q9NRF9 147 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 INPP5EQ9NRR6 644 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 PLSCR3Q9NRY6 295 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 NLKQ9UBE8 527 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 ADAM30Q9UKF2 790 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 MPDZO75970 2070 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 EML5Q05BV3 1969 aa9.09□□□□□ -0.95
CLIP1-204ENST00000501271 FAM221BA6H8Z2 402 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 FAM172BPA6NC97 362 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 J3QLW9 94 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 GNB5O14775 395 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 TNFP01375 233 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 EIF4EP06730 217 aaKnown RBP9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms