RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 OR4F3Q6IEY1 312 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 C3orf33Q6P1S2 294 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 EIF3MQ7L2H7 374 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 CLECL1Q8IZS7 167 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 KIRREL3Q8IZU9 778 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 GABRG1Q8N1C3 465 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 ZNF611Q8N823 705 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 OR8J2Q8NGG1 315 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 OR4A15Q8NGL6 344 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 PKNOX2Q96KN3 472 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 PPP1R36Q96LQ0 422 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 TMEM204Q9BSN7 226 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 THUMPD3Q9BV44 507 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 TMEM109Q9BVC6 243 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 DPY30Q9C005 99 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 ESRP2Q9H6T0 727 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 COQ10BQ9H8M1 238 aa10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.46□□□□□ -0.73
NUDCD3-211ENST00000497978 ZNF469Q96JG9 3925 aaPredicted RBP10.46□□□□□ -0.74
NUDCD3-211ENST00000497978 IGHV3-15A0A0B4J1V0 119 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 PRSS51A0A1B0GVH4 220 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 A0A1W2PNR3 127 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 ETV2O00321 342 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 ITM2AO43736 263 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 CD3EP07766 207 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 PAX1P15863 534 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 PGCP20142 388 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 UQCRC2P22695 453 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 ATP5J2P56134 94 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 CSNK2A1P68400 391 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 ZNF844Q08AG5 666 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 RASGEF1BQ0VAM2 473 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 SKP2Q13309 424 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 ITGADQ13349 1161 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 TIGD2Q4W5G0 525 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 WDR93Q6P2C0 686 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 CIARTQ8N365 385 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 ZNF781Q8N8C0 355 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 XAGE5Q8WWM1 108 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 OIT3Q8WWZ8 545 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 AKAP1Q92667 903 aaKnown RBP eCLIP10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 OR5B2Q96R09 309 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 OR51I1Q9H343 314 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 AKTIPQ9H8T0 292 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 BCO1Q9HAY6 547 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 POLE3Q9NRF9 147 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 MKLN1Q9UL63 735 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 RAP2CQ9Y3L5 183 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 RNF115Q9Y4L5 304 aa10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 SPIN1Q9Y657 262 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-211ENST00000497978 TRIM64A6NGJ6 449 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ESPNB1AK53 854 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 TM9SF1O15321 606 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 CLOCKO15516 846 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 FCMRO60667 390 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 CYTIPO60759 359 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 UGT2B17O75795 530 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 CNOT4O95628 575 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 CPSF4O95639 269 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 FESP07332 822 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 GUSBP08236 651 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 UBTFL6P0CB48 400 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 OR3A2P47893 321 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 SLC1A6P48664 564 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 RPL14P50914 215 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 CLNS1AP54105 237 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 SESN3P58005 492 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 RPS4XP62701 263 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 MERTKQ12866 999 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 TSC22D1Q15714 1073 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 TAB1Q15750 504 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 DPY19L1Q2PZI1 675 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 NCMAPQ5T1S8 102 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ADAM5Q6NVV9 412 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 Q6ZT83 130 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 BHLHA15Q7RTS1 189 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ANKRD46Q86W74 232 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 CLEC4FQ8N1N0 589 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ZNF563Q8TA94 476 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 MIPOL1Q8TD10 442 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 SLC25A43Q8WUT9 341 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 IGFBPL1Q8WX77 278 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 FBXW5Q969U6 566 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 TRMT61AQ96FX7 289 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 PSD2Q9BQI7 771 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 OCSTAMPQ9BR26 566 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 POTEKPQ9BYX7 375 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ZNF350Q9GZX5 532 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 QRSL1Q9H0R6 528 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 SERHL2Q9H4I8 314 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 SSU72Q9NP77 194 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ACER3Q9NUN7 267 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ZNF701Q9NV72 531 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 LAMP3Q9UQV4 416 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 SLC35A3Q9Y2D2 325 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 WDR45Q9Y484 360 aa10.44□□□□□ -0.74
NUDCD3-211ENST00000497978 ROS1P08922 2347 aa10.43□□□□□ -0.74
NUDCD3-211ENST00000497978 ZNF724A8MTY0 619 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms