RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RANBP3LQ86VV4 465 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZC3HC1Q86WB0 502 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PAQR7Q86WK9 346 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF280BQ86YH2 543 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CALHM1Q8IU99 346 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 C10orf107Q8IVU9 208 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PGAM4Q8N0Y7 254 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MTURNQ8N3F0 131 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM132CQ8N3T6 1108 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM156Q8N614 296 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 FITM2Q8N6M3 262 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PACRGLQ8N7B6 248 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GATSQ8NAP1 163 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NECAP1Q8NC96 275 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM185AQ8NFB2 350 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PROKR2Q8NFJ6 384 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TSPAN14Q8NG11 270 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OR9Q1Q8NGQ5 310 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OR13D1Q8NGV5 346 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CD200R1Q8TD46 325 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PIGBQ92521 554 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ST6GALNAC6Q969X2 333 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC35C1Q96A29 364 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ELMOD3Q96FG2 381 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 THOC3Q96J01 351 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ST6GAL2Q96JF0 529 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NOL4LQ96MY1 436 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF583Q96ND8 569 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TECTBQ96PL2 329 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TSSK3Q96PN8 268 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OR2V2Q96R30 315 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TSNAXQ99598 290 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 EGFL8Q99944 293 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 INPP5KQ9BT40 448 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ADI1Q9BV57 179 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF747Q9BV97 191 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 UGT2B28Q9BY64 529 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RPF2Q9H7B2 306 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MTHFD2LQ9H903 347 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 HRASLSQ9HDD0 168 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SPAG4Q9NPE6 437 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SAR1AQ9NR31 198 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MED9Q9NWA0 146 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MED11Q9P086 117 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 METTL1Q9UBP6 276 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SEC14L4Q9UDX3 406 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SEC14L3Q9UDX4 400 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF639Q9UID6 485 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MMP24Q9Y5R2 645 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TNS2Q63HR2 1409 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CHD4Q14839 1912 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNE1BA0A087WTH5 132 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HYKKA2RU49 373 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HEPACAM2A8MVW5 462 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SGK494L7N484 410 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 IMPA2O14732 288 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CDIPTO14735 213 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FOXN1O15353 648 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TCF21O43680 179 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FZD7O75084 574 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 LYPLA1O75608 230 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 RPN2P04844 631 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 EBLN1P0CF75 366 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 VSIG10L2P0DP72 767 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HAPLN1P10915 354 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PNMTP11086 282 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GABRA1P14867 456 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CEBPBP17676 345 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HLA-GP17693 338 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CD22P20273 847 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GZMHP20718 246 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ACHEP22303 614 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FDXRP22570 491 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HOXC9P31274 260 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CEACAM8P31997 349 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TIMP3P35625 211 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PLA2G5P39877 138 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GRIA1P42261 906 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MMP13P45452 471 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GABRA4P48169 554 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SELENOPP49908 381 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DLX5P56178 289 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PTENP60484 403 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CDC42P60953 191 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 E2F1Q01094 437 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DUSP2Q05923 314 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 RBPJQ06330 500 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AESQ08117 197 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF616Q08AN1 781 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 UBXN2BQ14CS0 331 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MST1LQ2TV78 715 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SMIM21Q3B7S5 101 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PIGGQ5H8A4 983 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AVPI1Q5T686 147 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 C9orf135Q5VTT2 229 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DCAF12L1Q5VU92 463 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PRAMEF7Q5VXH5 474 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TTC23Q5W5X9 447 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DOK6Q6PKX4 331 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NHLRC1Q6VVB1 395 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms