RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SRXN1Q9BYN0 137 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 LIME1Q9H400 295 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 CCM2LQ9NUG4 571 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-213ENST00000496347 KLHL28Q9NXS3 571 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 ZIM2Q9NZV7 527 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 ZNF469Q96JG9 3925 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-213ENST00000496347 FREM1Q5H8C1 2179 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 NF1P21359 2839 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 RFXANKO14593 260 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 SLC22A3O75751 556 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 ATE1O95260 518 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 H6PDO95479 791 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 PGCP20142 388 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 TMEM176BQ3YBM2 270 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-213ENST00000496347 TIGD2Q4W5G0 525 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 FCRLAQ7L513 359 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 SLC43A2Q8N370 569 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 ZNF610Q8N9Z0 462 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 C7orf26Q96N11 449 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 WFIKKN1Q96NZ8 548 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 OR10A4Q9H209 315 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 CLEC4AQ9UMR7 237 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 SPIN1Q9Y657 262 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-213ENST00000496347 ARID1AO14497 2285 aa14.04□□□□□ -0.16
HDAC4-213ENST00000496347 DEFB108AA8MXU0 73 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 EFNA2O43921 213 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 CYP7B1O75881 506 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 KRT75O95678 551 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 RPS4Y1P22090 263 aaKnown RBP14.03□□□□□ -0.16
HDAC4-213ENST00000496347 CDKN2CP42773 168 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 SESN3P58005 492 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 RAC3P60763 192 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 KEAP1Q14145 624 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 POU4F3Q15319 338 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 MAPK14Q16539 360 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 EXOC3L2Q2M3D2 409 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 SLC9B1Q4ZJI4 515 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 GPAT3Q53EU6 434 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 TMEM201Q5SNT2 666 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 DNAJC14Q6Y2X3 702 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-213ENST00000496347 BEND4Q6ZU67 534 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 PMM1Q92871 262 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 INPP5KQ9BT40 448 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 THUMPD3Q9BV44 507 aaKnown RBP14.03□□□□□ -0.16
HDAC4-213ENST00000496347 RMND5AQ9H871 391 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 SERINC1Q9NRX5 453 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 ACER3Q9NUN7 267 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 KLHL9Q9P2J3 617 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 RAI1Q7Z5J4 1906 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-213ENST00000496347 VPS13CQ709C8 3753 aa14.03□□□□□ -0.16
HDAC4-213ENST00000496347 A0A1W2PPR1 153 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 AGAP5A6NIR3 686 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 UBDO15205 165 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 DIAPH2O60879 1101 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 PSMB1P20618 241 aaKnown RBP14.02□□□□□ -0.17
HDAC4-213ENST00000496347 KCNJ10P78508 379 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 MERTKQ12866 999 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 GNA13Q14344 377 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 SYT14P1Q58G82 188 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 TFAP2EQ6VUC0 442 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 STAC2Q6ZMT1 411 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 LRRC74BQ6ZQY2 392 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF621Q6ZSS3 439 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 PLEKHM3Q6ZWE6 761 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 GRINAQ7Z429 371 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 MIER2Q8N344 545 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ARFGAP2Q8N6H7 521 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF75CPQ92670 426 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF524Q96C55 264 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ATP6V1G3Q96LB4 118 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 KLHL4Q9C0H6 718 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 SLC38A1Q9H2H9 487 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 BCO1Q9HAY6 547 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-213ENST00000496347 C6orf203Q9P0P8 240 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-213ENST00000496347 P2RX2Q9UBL9 471 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 USH1CQ9Y6N9 552 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 ZFHX3Q15911 3703 aa14.02□□□□□ -0.17
HDAC4-213ENST00000496347 PRR14LQ5THK1 2151 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 PRAMEF27A3QJZ7 478 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 SIAH2O43255 324 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 PRKD3O94806 890 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 TGDSO95455 350 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 CHRM4P08173 479 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 ZCCHC18P0CG32 403 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 FKBP2P26885 142 aaKnown RBP14.01□□□□□ -0.17
HDAC4-213ENST00000496347 APOBEC1P41238 236 aaKnown RBP14.01□□□□□ -0.17
HDAC4-213ENST00000496347 MRPL19P49406 292 aaKnown RBP14.01□□□□□ -0.17
HDAC4-213ENST00000496347 CSNK2A1P68400 391 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-213ENST00000496347 PLAURQ03405 335 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 CHRNEQ04844 493 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 DEFB113Q30KQ7 82 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF550Q7Z398 422 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 ANKFN1Q8N957 763 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 ATP6V1C2Q8NEY4 427 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 LRRC8CQ8TDW0 803 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 ROBO4Q8WZ75 1007 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 ITCHQ96J02 903 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 MARK4Q96L34 752 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms