RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 IL17RDQ8NFM7 739 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 SLC2A12Q8TD20 617 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 PTP4A1Q93096 173 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 KISS1RQ969F8 398 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-208ENST00000496116 LRFN5Q96NI6 719 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 GAS2L1Q99501 681 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-208ENST00000496116 TBX5Q99593 518 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 ORAI3Q9BRQ5 295 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 MKKSQ9NPJ1 570 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-208ENST00000496116 SLC2A4RGQ9NR83 387 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 INIPQ9NRY2 104 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 ADAM30Q9UKF2 790 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 PLCL2Q9UPR0 1127 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 OR10H1Q9Y4A9 318 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 MTCH2Q9Y6C9 303 aa10.21□□□□□ -0.77
CMSS1-208ENST00000496116 ZC3H12DA2A288 527 aaKnown RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 TMEM221A6NGB7 291 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 CD8B2A6NJW9 211 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 GTPBP1O00178 669 aaKnown RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 REM1O75628 298 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 PPP1R3DO95685 299 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 CD8BP10966 210 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 NME1P15531 152 aaKnown RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 GPR3P46089 330 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 CAV3P56539 151 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 HSD17B7P56937 341 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 OR2B6P58173 313 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 ACTC1P68032 377 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 ACTA1P68133 377 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 DAB2P98082 770 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 MAT1AQ00266 395 aaKnown RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 BIKQ13323 160 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 FZD5Q13467 585 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 ASAH1Q13510 395 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 CARTPTQ16568 116 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 TCTE1Q5JU00 501 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 AGAP6Q5VW22 663 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 VASNQ6EMK4 673 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF544Q6NX49 715 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF517Q6ZMY9 492 aaPredicted RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 RAB43Q86YS6 212 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 TMEM99Q8N816 258 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 OR5W2Q8NH69 310 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 RLN3Q8WXF3 142 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 MMABQ96EY8 250 aaPredicted RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 ART5Q96L15 291 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 AGAP4Q96P64 663 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 TNFRSF13CQ96RJ3 184 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 PELOQ9BRX2 385 aaKnown RBP10.21□□□□□ -0.78
CMSS1-208ENST00000496116 HCAR1Q9BXC0 346 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 SLC22A4Q9H015 551 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 OR10A5Q9H207 317 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 HAO2Q9NYQ3 351 aa10.21□□□□□ -0.78
CMSS1-208ENST00000496116 IGHV1OR15-9A0A0B4J2B8 117 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 CCDC182A6NF36 153 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 EFCAB7A8K855 629 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 TGFBR3LH3BV60 316 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SSX4O60224 188 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 CSTAP01040 98 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 IFNA16P05015 189 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 CSF3P09919 207 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SBK2P0C263 348 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 CHRNB1P11230 501 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 PTBP1P26599 531 aaKnown RBP eCLIP10.2□□□□□ -0.781e-10■■■■■ 30.5
CMSS1-208ENST00000496116 CD38P28907 300 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 CASP3P42574 277 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 PGDP52209 483 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 FUT7Q11130 342 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SERTAD2Q14140 314 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 CRMP1Q14194 572 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 GAS6Q14393 721 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 NPSR1Q6W5P4 371 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 LINC00114Q6XXX2 140 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SPATC1Q76KD6 591 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 LMX1AQ8TE12 382 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 ACOT12Q8WYK0 555 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 ARSGQ96EG1 525 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SPACA7Q96KW9 195 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 DCLRE1CQ96SD1 692 aaKnown RBP10.2□□□□□ -0.78
CMSS1-208ENST00000496116 ATF6BQ99941 703 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 TPSD1Q9BZJ3 242 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SOHLH2Q9NX45 425 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 PRODH2Q9UF12 536 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 ERVK-19Q9WJR5 959 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 DTX4Q9Y2E6 619 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 SLCO1B1Q9Y6L6 691 aa10.2□□□□□ -0.78
CMSS1-208ENST00000496116 C2orf92A0A1B0GVN3 265 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 NPIPB9F8W1W9 429 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 H0YIG0 161 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 HRKO00198 91 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 SEC14L5O43304 696 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 ADAM11O75078 769 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 PPM1BO75688 479 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 NDUFB2O95178 105 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 NGFRP08138 427 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 MRPL3P09001 348 aaKnown RBP10.19□□□□□ -0.78
CMSS1-208ENST00000496116 SRFP11831 508 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 SLC2A5P22732 501 aa10.19□□□□□ -0.78
CMSS1-208ENST00000496116 CD27P26842 260 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms