RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 FRRS1Q6ZNA5 592 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 CMIPQ8IY22 773 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 COQ10BQ9H8M1 238 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 ACER3Q9NUN7 267 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 ZIM2Q9NZV7 527 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 PRRC2AP48634 2157 aaKnown RBP21.63■■□□□ 1.05
HLA-C-209ENST00000495835 SLC22A3O75751 556 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 UBTFL6P0CB48 400 aaPredicted RBP21.62■■□□□ 1.05
HLA-C-209ENST00000495835 APOBEC1P41238 236 aaKnown RBP21.62■■□□□ 1.05
HLA-C-209ENST00000495835 CASP9P55211 416 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 NME5P56597 212 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 SESN3P58005 492 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 KCNJ10P78508 379 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 MAPK14Q16539 360 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 TIGD2Q4W5G0 525 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 GPAT3Q53EU6 434 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 NXNQ6DKJ4 435 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 LRRC74BQ6ZQY2 392 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 ZNF621Q6ZSS3 439 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 MSANTD1Q6ZTZ1 278 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 FCRLAQ7L513 359 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 SLC25A43Q8WUT9 341 aaPredicted RBP21.62■■□□□ 1.05
HLA-C-209ENST00000495835 ROBO4Q8WZ75 1007 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 ZNF75CPQ92670 426 aaPredicted RBP21.62■■□□□ 1.05
HLA-C-209ENST00000495835 HDHD5Q9BXW7 423 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 SRXN1Q9BYN0 137 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 KLHL4Q9C0H6 718 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 KLHL13Q9P2N7 655 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 GPR52Q9Y2T5 361 aa21.62■■□□□ 1.05
HLA-C-209ENST00000495835 CENPVL1A0A0U1RR11 272 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 DEFB108AA8MXU0 73 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 RFXANKO14593 260 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 CYP7B1O75881 506 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 KRT75O95678 551 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 YES1P07947 543 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 ZCCHC18P0CG32 403 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 DEFB113Q30KQ7 82 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 STAC2Q6ZMT1 411 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 RNF130Q86XS8 419 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 ZNF524Q96C55 264 aa21.61■■□□□ 1.05
HLA-C-209ENST00000495835 MTHFD2LQ9H903 347 aaPredicted RBP21.61■■□□□ 1.05
HLA-C-209ENST00000495835 SDR39U1Q9NRG7 319 aaPredicted RBP21.61■■□□□ 1.05
HLA-C-209ENST00000495835 SPIN1Q9Y657 262 aaPredicted RBP21.61■■□□□ 1.05
HLA-C-209ENST00000495835 PRAMEF27A3QJZ7 478 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 UBDO15205 165 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 H6PDO95479 791 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 PSMB1P20618 241 aaKnown RBP21.6■■□□□ 1.05
HLA-C-209ENST00000495835 CLK1P49759 484 aaKnown RBP21.6■■□□□ 1.05
HLA-C-209ENST00000495835 POU4F3Q15319 338 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 EXOC3L2Q2M3D2 409 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 SLC9B1Q4ZJI4 515 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 TGIF2LYQ8IUE0 185 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 MARK4Q96L34 752 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 USB1Q9BQ65 265 aaKnown RBP21.6■■□□□ 1.05
HLA-C-209ENST00000495835 INPP5KQ9BT40 448 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 TMUB1Q9BVT8 246 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 RMND5AQ9H871 391 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 BCO1Q9HAY6 547 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 KLHL9Q9P2J3 617 aa21.6■■□□□ 1.05
HLA-C-209ENST00000495835 A0A1W2PPR1 153 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 TGDSO95455 350 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 CDKN2CP42773 168 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 CSNK2A1P68400 391 aaPredicted RBP21.59■■□□□ 1.05
HLA-C-209ENST00000495835 CHRNEQ04844 493 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 MERTKQ12866 999 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 GNA13Q14344 377 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 PLEKHM3Q6ZWE6 761 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 OLIG3Q7RTU3 272 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 ARFGAP2Q8N6H7 521 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 ATP6V1C2Q8NEY4 427 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 ABHD3Q8WU67 409 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 ZG16BQ96DA0 208 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 C7orf26Q96N11 449 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 SLC38A1Q9H2H9 487 aa21.59■■□□□ 1.05
HLA-C-209ENST00000495835 BEX4Q9NWD9 120 aaPredicted RBP21.59■■□□□ 1.05
HLA-C-209ENST00000495835 C6orf203Q9P0P8 240 aaPredicted RBP21.59■■□□□ 1.05
HLA-C-209ENST00000495835 AGAP5A6NIR3 686 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 SIAH2O43255 324 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 CD53P19397 219 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 ENPP1P22413 925 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 HTR3AP46098 478 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 SYPL1Q16563 259 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 TMPPEQ6ZT21 453 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 ZNF550Q7Z398 422 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 GRINAQ7Z429 371 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 TUSC5Q8IXB3 177 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 ZNF563Q8TA94 476 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 CCDC106Q9BWC9 280 aa21.58■■□□□ 1.05
HLA-C-209ENST00000495835 THUMPD1Q9NXG2 353 aaKnown RBP21.58■■□□□ 1.05
HLA-C-209ENST00000495835 FAAHO00519 579 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 CYTIPO60759 359 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 CD99P14209 185 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 FPR1P21462 350 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 MRPL19P49406 292 aaKnown RBP21.57■■□□□ 1.04
HLA-C-209ENST00000495835 MAP2K6P52564 334 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 RIPPLY3P57055 190 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 PPP2R2AP63151 447 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 SYT14P1Q58G82 188 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 BEX5Q5H9J7 111 aa21.57■■□□□ 1.04
HLA-C-209ENST00000495835 EPGNQ6UW88 154 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms