RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 OR5J2Q8NH18 312 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 HS6ST2Q96MM7 605 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 PINK1Q9BXM7 581 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 MTHFD2LQ9H903 347 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 ACSS1Q9NUB1 689 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 DIMT1Q9UNQ2 313 aaKnown RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 PIAS3Q9Y6X2 628 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 NUPL2O15504 423 aaKnown RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 SELENOFO60613 162 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 EPPINO95925 133 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ADPRHP54922 357 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 ADAM15Q13444 863 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ENPP2Q13822 863 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 FCN2Q15485 313 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 UBQLNLQ8IYU4 475 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 OR4D9Q8NGE8 314 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 OR6N2Q8NGY6 317 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 CHAC2Q8WUX2 184 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 RFT1Q96AA3 541 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 TXNDC15Q96J42 360 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 SDF2Q99470 211 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 FAM83CQ9BQN1 747 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 NDUFB11Q9NX14 153 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 THAP10Q9P2Z0 257 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 PLEKHB1Q9UF11 243 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 A0A0A6YYD5 115 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 SCO2O43819 266 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 COL9A1P20849 921 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 HSD17B2P37059 387 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 RAB40BQ12829 278 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 RPA4Q13156 261 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 LRRC37A5PQ49AS3 106 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 YOD1Q5VVQ6 348 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 VN1R4Q7Z5H5 301 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 CAMKMTQ7Z624 323 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 OR13H1Q8NG92 308 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 OR6F1Q8NGZ6 308 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 FBLIM1Q8WUP2 373 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 AHCYL2Q96HN2 611 aaKnown RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 WDR92Q96MX6 357 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 CACNG6Q9BXT2 260 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 KCNN2Q9H2S1 579 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 CALML5Q9NZT1 146 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 V9GYH0 126 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 TRAPPC13A5PLN9 417 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 FAM47E-STBD1D6RA91 191 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 MT-ND5P03915 603 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 OR8G3PP0DMU2 310 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 EVI2BP34910 448 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 GAS6Q14393 721 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 OR5H6Q8NGV6 325 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 MS4A4EQ96PG1 132 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 SLC38A3Q99624 504 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 FKRPQ9H9S5 495 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 BABAM2Q9NXR7 383 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 LRIT1Q9P2V4 623 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 FAM25EA8MYX2 175 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 DHFRP00374 187 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 EIF4EP06730 217 aaKnown RBP12.47□□□□□ -0.41
GPC1-209ENST00000495100 HK1P19367 917 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 PEBP1P30086 187 aaKnown RBP12.47□□□□□ -0.41
GPC1-209ENST00000495100 PRMT2P55345 433 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 FOXK2Q01167 660 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 PON3Q15166 354 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 POU4F3Q15319 338 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 NDUFA9Q16795 377 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 ABHD13Q7L211 337 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 CAMKVQ8NCB2 501 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 RIT1Q92963 219 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 ADAD1Q96M93 576 aaKnown RBP12.47□□□□□ -0.41
GPC1-209ENST00000495100 GINS4Q9BRT9 223 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 OR6C2Q9NZP2 312 aa12.47□□□□□ -0.41
GPC1-209ENST00000495100 DHCR7Q9UBM7 475 aaKnown RBP12.47□□□□□ -0.41
GPC1-209ENST00000495100 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 FABP7O15540 132 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 HOXC11O43248 304 aaPredicted RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 SNRPGP62308 76 aaKnown RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 HHEXQ03014 270 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ZNF33BQ06732 778 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 SHHQ15465 462 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 FBXO42Q6P3S6 717 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ZNF613Q6PF04 617 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 XKRXQ6PP77 449 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ZNF676Q8N7Q3 588 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ELOA3Q8NG57 546 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ZNF431Q8TF32 576 aaPredicted RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 TSEN15Q8WW01 171 aaKnown RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 ADOQ96SZ5 270 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 ZFYVE21Q9BQ24 234 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 FUZQ9BT04 418 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms