RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 TBPL2Q6SJ96 375 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 WDR88Q6ZMY6 472 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 GDF7Q7Z4P5 450 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 HS3ST5Q8IZT8 346 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 SVOPLQ8N434 492 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 OR2M3Q8NG83 312 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 OR52J3Q8NH60 311 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 OR5K1Q8NHB7 308 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 GPR119Q8TDV5 335 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 SNRNP27Q8WVK2 155 aaKnown RBP11.01□□□□□ -0.65
BRD3-206ENST00000494743 C3orf49Q96BT1 292 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 TMEM41AQ96HV5 264 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 SMAD5Q99717 465 aaKnown RBP11.01□□□□□ -0.65
BRD3-206ENST00000494743 PSD2Q9BQI7 771 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 PRSS27Q9BQR3 290 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 ZNF426Q9BUY5 554 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 FNDC11Q9BVV2 318 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 GABARAPL1Q9H0R8 117 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 TMEM27Q9HBJ8 222 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 TIMMDC1Q9NPL8 285 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 SDHAF3Q9NRP4 125 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 SACM1LQ9NTJ5 587 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 DEPPQ9NTK1 212 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 PPP4R1LQ9P1A2 415 aa11.01□□□□□ -0.65
BRD3-206ENST00000494743 MAGED1Q9Y5V3 778 aaPredicted RBP11.01□□□□□ -0.65
BRD3-206ENST00000494743 TEP1Q99973 2627 aaKnown RBP11□□□□□ -0.65
BRD3-206ENST00000494743 ARRDC5A6NEK1 342 aa11□□□□□ -0.65
BRD3-206ENST00000494743 LRRC3CA6NJW4 275 aa11□□□□□ -0.65
BRD3-206ENST00000494743 G3V2T6 193 aa11□□□□□ -0.65
BRD3-206ENST00000494743 G3V3Y1 287 aa11□□□□□ -0.65
BRD3-206ENST00000494743 PDLIM1O00151 329 aa11□□□□□ -0.65
BRD3-206ENST00000494743 SOCS2O14508 198 aa11□□□□□ -0.65
BRD3-206ENST00000494743 CHP2O43745 196 aa11□□□□□ -0.65
BRD3-206ENST00000494743 PEX1O43933 1283 aa11□□□□□ -0.65
BRD3-206ENST00000494743 E2F6O75461 281 aa11□□□□□ -0.65
BRD3-206ENST00000494743 UQCRBP14927 111 aa11□□□□□ -0.65
BRD3-206ENST00000494743 ZNF23P17027 643 aa11□□□□□ -0.65
BRD3-206ENST00000494743 ZNF26P17031 533 aaPredicted RBP11□□□□□ -0.65
BRD3-206ENST00000494743 SLC1A3P43003 542 aa11□□□□□ -0.65
BRD3-206ENST00000494743 IDH2P48735 452 aaKnown RBP11□□□□□ -0.65
BRD3-206ENST00000494743 TMPRSS3P57727 454 aa11□□□□□ -0.65
BRD3-206ENST00000494743 PPP2R2BQ00005 443 aa11□□□□□ -0.65
BRD3-206ENST00000494743 SRSF1Q07955 248 aaKnown RBP eCLIP11□□□□□ -0.65
BRD3-206ENST00000494743 LAPTM4AQ15012 233 aa11□□□□□ -0.65
BRD3-206ENST00000494743 TRAM2Q15035 370 aa11□□□□□ -0.65
BRD3-206ENST00000494743 SEC23BQ15437 767 aa11□□□□□ -0.65
BRD3-206ENST00000494743 TOMM34Q15785 309 aaPredicted RBP11□□□□□ -0.65
BRD3-206ENST00000494743 WBP2NLQ6ICG8 309 aa11□□□□□ -0.65
BRD3-206ENST00000494743 ZNF770Q6IQ21 691 aaPredicted RBP11□□□□□ -0.65
BRD3-206ENST00000494743 ULK3Q6PHR2 472 aa11□□□□□ -0.65
BRD3-206ENST00000494743 LINC00114Q6XXX2 140 aa11□□□□□ -0.65
BRD3-206ENST00000494743 LRRC69Q6ZNQ3 347 aa11□□□□□ -0.65
BRD3-206ENST00000494743 PLCZ1Q86YW0 608 aa11□□□□□ -0.65
BRD3-206ENST00000494743 HIPK1Q86Z02 1210 aa11□□□□□ -0.65
BRD3-206ENST00000494743 ZDHHC13Q8IUH4 622 aa11□□□□□ -0.65
BRD3-206ENST00000494743 CBR4Q8N4T8 237 aa11□□□□□ -0.65
BRD3-206ENST00000494743 EME1Q96AY2 570 aa11□□□□□ -0.65
BRD3-206ENST00000494743 SLC29A1Q99808 456 aa11□□□□□ -0.65
BRD3-206ENST00000494743 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
BRD3-206ENST00000494743 MED11Q9P086 117 aa11□□□□□ -0.65
BRD3-206ENST00000494743 FBXL2Q9UKC9 423 aa11□□□□□ -0.65
BRD3-206ENST00000494743 SLC7A7Q9UM01 511 aa11□□□□□ -0.65
BRD3-206ENST00000494743 PCDHGA9Q9Y5G4 932 aaKnown RBP11□□□□□ -0.65
BRD3-206ENST00000494743 CPAMD8Q8IZJ3 1885 aa11□□□□□ -0.65
BRD3-206ENST00000494743 COL6A6A6NMZ7 2263 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 A0A087WUU8 490 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 SH3PXD2BA1X283 911 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 GMFGO60234 142 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 NME2P1O60361 137 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 RASAL1O95294 804 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 WISP1O95388 367 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 NTN1O95631 604 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 CNR1P21554 472 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 NME2P22392 152 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 IFNA8P32881 189 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 VHLP40337 213 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 DNASE1L1P49184 302 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 TNFSF10P50591 281 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 COPZ1P61923 177 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
BRD3-206ENST00000494743 FOXO1Q12778 655 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 QPRTQ15274 297 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 LRRC36Q1X8D7 754 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 MICAQ29983 383 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 ALG10BQ5I7T1 473 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 FGD3Q5JSP0 725 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 DCST1Q5T197 706 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 TIGD3Q6B0B8 471 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 PPP4R4Q6NUP7 873 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 PODNL1Q6PEZ8 512 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 ARSKQ6UWY0 536 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 ZBTB49Q6ZSB9 765 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 ATG4DQ86TL0 474 aaPredicted RBP10.99□□□□□ -0.65
BRD3-206ENST00000494743 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 LSRQ86X29 649 aaPredicted RBP10.99□□□□□ -0.65
BRD3-206ENST00000494743 NKAIN4Q8IVV8 208 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 CADM2Q8N3J6 435 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 PACRGLQ8N7B6 248 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 TMEM255BQ8WV15 326 aa10.99□□□□□ -0.65
BRD3-206ENST00000494743 DNAJA4Q8WW22 397 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms