RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DIMT1Q9UNQ2 313 aaKnown RBP12.89□□□□□ -0.35
PTPN7-216ENST00000492977 SIGLEC7Q9Y286 467 aa12.89□□□□□ -0.35
PTPN7-216ENST00000492977 COL6A3P12111 3177 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
PTPN7-216ENST00000492977 ZNF264O43296 627 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 RFPL3O75679 317 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 PPM1BO75688 479 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 LDOC1O95751 146 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-216ENST00000492977 RAB36O95755 333 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 ADRA2AP08913 450 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 SAGP10523 405 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-216ENST00000492977 ZNF182P17025 639 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-216ENST00000492977 LIPAP38571 399 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 MPLP40238 635 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 EMP2P54851 167 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 FXYD6P3P58550 94 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 RAB40BQ12829 278 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 SKP2Q13309 424 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 AQP6Q13520 282 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 CD226Q15762 336 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 LPAL2Q16609 132 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 NDUFAF6Q330K2 333 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 ARMCX4Q5H9R4 360 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 FAAH2Q6GMR7 532 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 SMARCD3Q6STE5 483 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 PRR23CQ6ZRP0 262 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 SLC46A3Q7Z3Q1 461 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 LNX2Q8N448 690 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 MARVELD3Q96A59 401 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 ARSGQ96EG1 525 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 LAT2Q9GZY6 243 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 BAIAP2Q9UQB8 552 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 GPR52Q9Y2T5 361 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
PTPN7-216ENST00000492977 SAGE2PA6NJ88 616 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 AGRPO00253 132 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 BHLHE40O14503 412 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
PTPN7-216ENST00000492977 CH25HO95992 272 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 PNMTP11086 282 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 NR4A1P22736 598 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 ACP1P24666 158 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 SLC6A8P48029 635 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 SPCS2Q15005 226 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 ANGPT1Q15389 498 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 APOOLQ6UXV4 268 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 RTL4Q6ZR62 310 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 OAFQ86UD1 273 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 NFAM1Q8NET5 270 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-216ENST00000492977 PROKR2Q8NFJ6 384 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 C3orf49Q96BT1 292 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 OMA1Q96E52 524 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 MND1Q9BWT6 205 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 FN3KQ9H479 309 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 APMAPQ9HDC9 416 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 FGF20Q9NP95 211 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-216ENST00000492977 HEATR5AQ86XA9 2040 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 LAMA1P25391 3075 aa12.87□□□□□ -0.35
PTPN7-216ENST00000492977 ALG1L2C9J202 215 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 MEN1O00255 615 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 ICOSLGO75144 302 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 IGF2P01344 180 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 FUT1P19526 365 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 ABCD3P28288 659 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 MTNR1AP48039 350 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 RGS6P49758 472 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 GAS1P54826 345 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 RNF4P78317 190 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 MC2RQ01718 297 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 CRYZQ08257 329 aaKnown RBP12.86□□□□□ -0.35
PTPN7-216ENST00000492977 MED22Q15528 200 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 C3orf38Q5JPI3 329 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 NXNL2Q5VZ03 156 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 NANOGP1Q8N7R0 232 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 BMPERQ8N8U9 685 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 GATSQ8NAP1 163 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 SGTBQ96EQ0 304 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 RNFT2Q96EX2 444 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 OR5M11Q96RB7 305 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 MGLLQ99685 303 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 TAS2R16Q9NYV7 291 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-216ENST00000492977 IL20RAQ9UHF4 553 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 CARD8Q9Y2G2 431 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 LSM2Q9Y333 95 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms