RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 NINQ8N4C6 2090 aa12.58□□□□□ -0.39
CCM2-217ENST00000492883 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 A1L4Q6 167 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 CCT8L1PA6NM43 557 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 KDM4EB2RXH2 506 aaPredicted RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 EFNA2O43921 213 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 ADAM11O75078 769 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 MFN2O95140 757 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 NTN1O95631 604 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 AGAP20933 346 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 TIMP3P35625 211 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 APOBEC1P41238 236 aaKnown RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 HTR3AP46098 478 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 EIF1AXP47813 144 aaKnown RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 EPS8Q12929 822 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 SELENBP1Q13228 472 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 TMEM176BQ3YBM2 270 aaPredicted RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 PPP4R4Q6NUP7 873 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 DHRS4L2Q6PKH6 230 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 SEM1Q6ZVN7 128 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 GRINAQ7Z429 371 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 PATL1Q86TB9 770 aaKnown RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 GGNQ86UU5 652 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 CCDC71Q8IV32 467 aaPredicted RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 SLC15A3Q8IY34 581 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 CADM2Q8N3J6 435 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 SMYD1Q8NB12 490 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 BHLHE22Q8NFJ8 381 aaPredicted RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 OR2T12Q8NG77 320 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 ASB5Q8WWX0 329 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 KLHL15Q96M94 604 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 ZNF583Q96ND8 569 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 PINK1Q9BXM7 581 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 CMTM6Q9NX76 183 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 KLHL28Q9NXS3 571 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
CCM2-217ENST00000492883 NUP214P35658 2090 aaPredicted RBP12.58□□□□□ -0.4
CCM2-217ENST00000492883 A0A0G2JNJ9 132 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 A0A0J9YW62 118 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 SLC22A20A6NK97 555 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 HSPB2A8KAH6 182 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 FAM220BPB1ANY3 271 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 ETV2O00321 342 aaPredicted RBP12.57□□□□□ -0.4
CCM2-217ENST00000492883 FAAHO00519 579 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 TNFSF11O14788 317 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 TPST1O60507 370 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 TOXO94900 526 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PRG2P13727 222 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 CCNA2P20248 432 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 SLC7A1P30825 629 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 CHRNB4P30926 498 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 ACAA2P42765 397 aaKnown RBP12.57□□□□□ -0.4
CCM2-217ENST00000492883 SLC1A3P43003 542 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 SLC7A2P52569 658 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PCBP3P57721 371 aaKnown RBP12.57□□□□□ -0.4
CCM2-217ENST00000492883 CARD18P57730 90 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PSME3P61289 254 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 LIPEQ05469 1076 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 DMTNQ08495 405 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 VEZF1Q14119 521 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 HSPB2Q16082 182 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 HBMQ6B0K9 141 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 WBP2NLQ6ICG8 309 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PLXDC2Q6UX71 529 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 FITM2Q8N6M3 262 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 OR10D3Q8NH80 312 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 OR2V1Q8NHB1 315 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 WNT2BQ93097 391 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 ZNF845Q96IR2 970 aaPredicted RBP12.57□□□□□ -0.4
CCM2-217ENST00000492883 PSMG3-AS1Q96PY0 264 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 TM9SF2Q99805 663 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PRRG4Q9BZD6 226 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 CTPS2Q9NRF8 586 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PAQR5Q9NXK6 330 aaPredicted RBP12.57□□□□□ -0.4
CCM2-217ENST00000492883 CLCF1Q9UBD9 225 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 Q9UFV3 132 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 USP22Q9UPT9 525 aa12.57□□□□□ -0.4
CCM2-217ENST00000492883 SPIN1Q9Y657 262 aaPredicted RBP12.57□□□□□ -0.4
CCM2-217ENST00000492883 ELOVL7A1L3X0 281 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 ADAMDEC1O15204 470 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 FRS3O43559 492 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 CXCL13O43927 109 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 GCM2O75603 506 aaPredicted RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 SYNGR4O95473 234 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 CLDN14O95500 239 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 IFNA14P01570 189 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 OPN1SWP03999 348 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 TFPIP10646 304 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 SHC1P29353 583 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms