RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZFP90Q8TF47 636 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 HSD17B8Q92506 261 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 NEURL3Q96EH8 262 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 ZC3HAV1LQ96H79 300 aaKnown RBP7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 CCL19Q99731 98 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 PSD2Q9BQI7 771 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 THUMPD3Q9BV44 507 aaKnown RBP7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 CCDC106Q9BWC9 280 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 HEATR1Q9H583 2144 aaKnown RBP7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 MEAF6Q9HAF1 191 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 ACER3Q9NUN7 267 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 PRDM4Q9UKN5 801 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 RAB21Q9UL25 225 aa7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 SONP18583 2426 aaKnown RBP7.44□□□□□ -1.22
SMARCB1-207ENST00000491967 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PRAMEF27A3QJZ7 478 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 SMAD9O15198 467 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 CFLARO15519 480 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 BCAS1O75363 584 aaPredicted RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PGM3O95394 542 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 H6PDO95479 791 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 AGR2O95994 175 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 DANCRP0C864 163 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 UBL4AP11441 157 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 FKBP2P26885 142 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC1A6P48664 564 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PTH2RP49190 550 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC18A1P54219 525 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 TXNL4AP83876 142 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 H3F3AP84243 136 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 ITGADQ13349 1161 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 CBFBQ13951 182 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 TAB1Q15750 504 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PGS1Q32NB8 556 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 TIGD2Q4W5G0 525 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 TMEM201Q5SNT2 666 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 NCMAPQ5T1S8 102 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 ANXA8L1Q5VT79 327 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 TYW3Q6IPR3 259 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF704Q6ZNC4 412 aaPredicted RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 TMPPEQ6ZT21 453 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 SSX8Q7RTT4 187 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 MTDHQ86UE4 582 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 P3H2Q8IVL5 708 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 CLEC4FQ8N1N0 589 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PIWIL2Q8TC59 973 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PMM1Q92871 262 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 S100PBPQ96BU1 408 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 ZG16BQ96DA0 208 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PLPPR2Q96GM1 343 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 REXO5Q96IC2 774 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PKNOX2Q96KN3 472 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 CCDC115Q96NT0 180 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 BDH2Q9BUT1 245 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 PARD6BQ9BYG5 372 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 GRIP2Q9C0E4 1043 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 OR51I1Q9H343 314 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 UBTD1Q9HAC8 227 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 EXOSC3Q9NQT5 275 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 KLHL9Q9P2J3 617 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 BTNL2Q9UIR0 455 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 MKLN1Q9UL63 735 aa7.43□□□□□ -1.22
SMARCB1-207ENST00000491967 YLPM1P49750 1951 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 RNF103-CHMP3A0A140T963 221 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 DPRXA6NFQ7 191 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 AGAP5A6NIR3 686 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF716A6NP11 495 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 H7C1Q1 480 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 HMGN4O00479 90 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 FAAHO00519 579 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 RGS16O15492 202 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 DNPH1O43598 174 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 ADAM11O75078 769 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 NUDT14O95848 222 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 LY6G6DO95868 133 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 ADAP00813 363 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CSTAP01040 98 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 ALDOCP09972 364 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 LBPP18428 481 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 COX5AP20674 150 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 RPS4Y1P22090 263 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 EDNRAP25101 427 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 NTF4P34130 210 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 APOBEC1P41238 236 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 MAGEA8P43361 318 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CLK1P49759 484 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC16A1P53985 500 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CLNS1AP54105 237 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 GPR68Q15743 365 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 MAPK11Q15759 364 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 PDCD2Q16342 344 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 KRT71Q3SY84 523 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 SPANXN4Q5MJ08 99 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 ABLIM2Q6H8Q1 611 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 C3orf33Q6P1S2 294 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 FRRS1Q6ZNA5 592 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 DNM1P46Q6ZS02 220 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 EIF3MQ7L2H7 374 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms