RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PTH2RP49190 550 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 KHKP50053 298 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 RPL14P50914 215 aaKnown RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 CCR4P51679 360 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 RPS4XP62701 263 aaKnown RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 SKP2Q13309 424 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 PDK3Q15120 406 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 GPR68Q15743 365 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 KRT71Q3SY84 523 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.79□□□□□ -1.16
NUP50-217ENST00000491860 PDZK1Q5T2W1 519 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 HEPHL1Q6MZM0 1159 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 CBLN3Q6UW01 205 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 DNAJC14Q6Y2X3 702 aaPredicted RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 CXXC5Q7LFL8 322 aaKnown RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 WFDC8Q8IUA0 241 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 TUSC5Q8IXB3 177 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 CMIPQ8IY22 773 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 OR5D16Q8NGK9 328 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 RFWD2Q8NHY2 731 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 ABHD3Q8WU67 409 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 ROBO4Q8WZ75 1007 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 FBXW5Q969U6 566 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 S100PBPQ96BU1 408 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 RADILQ96JH8 1075 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 Q96MF0 132 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 SMR3AQ99954 134 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 EXOSC3Q9NQT5 275 aaKnown RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 ACER3Q9NUN7 267 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 ZNF701Q9NV72 531 aaPredicted RBP7.79□□□□□ -1.16
NUP50-217ENST00000491860 GIMAP2Q9UG22 337 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 LIPT1Q9Y234 373 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 HDGFL3Q9Y3E1 203 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 WDR45Q9Y484 360 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 RNF115Q9Y4L5 304 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
NUP50-217ENST00000491860 FBN1P35555 2871 aaKnown RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 KIAA1324LA8MWY0 1029 aaPredicted RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 SLCO1B7G3V0H7 640 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 SULT2B1O00204 365 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 KIAA0513O60268 411 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 PMS2P2O95744 297 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 OPN1LWP04000 364 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 S100A3P33764 101 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 CHI3L1P36222 383 aaPredicted RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 SLC1A6P48664 564 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 PPP2R2BQ00005 443 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 RASGEF1BQ0VAM2 473 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 CAPRIN1Q14444 709 aaKnown RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 CHI3L2Q15782 390 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 PDCD2Q16342 344 aaPredicted RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 ZSWIM7Q19AV6 140 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 TIGD2Q4W5G0 525 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 SYT14P1Q58G82 188 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 TIMM23BQ5SRD1 257 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 NCMAPQ5T1S8 102 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 OR4F3Q6IEY1 312 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 TMPPEQ6ZT21 453 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 BHLHA15Q7RTS1 189 aaPredicted RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 GRINAQ7Z429 371 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 SPATA19Q7Z5L4 167 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 GALNT5Q7Z7M9 940 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 ZNF619Q8N2I2 560 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 GLB1L3Q8NCI6 653 aaPredicted RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 OR5AK3PQ8NH89 298 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 ZNF563Q8TA94 476 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 NUDT8Q8WV74 236 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 AKAP1Q92667 903 aaKnown RBP eCLIP7.78□□□□□ -1.16
NUP50-217ENST00000491860 NEURL3Q96EH8 262 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 ZBTB18Q99592 522 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 NPAS1Q99742 590 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 PSD2Q9BQI7 771 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 THUMPD3Q9BV44 507 aaKnown RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 REPIN1Q9BWE0 567 aaKnown RBP7.78□□□□□ -1.16
NUP50-217ENST00000491860 SRXN1Q9BYN0 137 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 GRIP2Q9C0E4 1043 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 SAP130Q9H0E3 1048 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 OR51I1Q9H343 314 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 COQ10BQ9H8M1 238 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 BTNL2Q9UIR0 455 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 HAO1Q9UJM8 370 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 MGAT4BQ9UQ53 548 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 FREM1Q5H8C1 2179 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 JMJD1CQ15652 2540 aa7.78□□□□□ -1.16
NUP50-217ENST00000491860 CSPG4Q6UVK1 2322 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 IGKV3D-15A0A087WSY6 115 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 NPIPA5A0A0B4J1W7 369 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 TRPC5OSA6NMA1 111 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 ESPNB1AK53 854 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 E9PBE3 544 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 NPIPA7E9PJI5 369 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 H7C1Q1 480 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 EFNA2O43921 213 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 EIF1BO60739 113 aaKnown RBP7.77□□□□□ -1.17
NUP50-217ENST00000491860 UGT2B17O75795 530 aa7.77□□□□□ -1.17
NUP50-217ENST00000491860 CYP7B1O75881 506 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms