RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ITGA10O75578 1167 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 SNAPC5O75971 98 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 THY1P04216 161 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF19P17023 458 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 OR5M10Q6IEU7 315 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 TRAPPC5Q8IUR0 188 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 C16orf58Q96GQ5 468 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 MTG2Q9H4K7 406 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 PCDHB16Q9NRJ7 776 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 INPP5EQ9NRR6 644 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 FBXL2Q9UKC9 423 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 PRKAB1Q9Y478 270 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 MYO10Q9HD67 2058 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 A0A1W2PPK0 400 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 SUSD5O60279 629 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 RP2O75695 350 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 GATBO75879 557 aaKnown RBP17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 ZGLP1P0C6A0 271 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 CPN1P15169 458 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 TIMP2P16035 220 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 GPR68Q15743 365 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 ETFDHQ16134 617 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 C6orf132Q5T0Z8 1188 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 PRPF38BQ5VTL8 546 aaKnown RBP17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 B3GNTL1Q67FW5 361 aaPredicted RBP17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 GLDNQ6ZMI3 551 aaPredicted RBP17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 LINGO2Q7L985 606 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 GDF7Q7Z4P5 450 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 HSD17B13Q7Z5P4 300 aaPredicted RBP17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 GHSRQ92847 366 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC35C2Q9NQQ7 365 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF69Q9UC07 566 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF175Q9Y473 711 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 TRAV1-2A0A0B4J238 106 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 A0A0G2JN53 185 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 FEZF1A0PJY2 475 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 OR2M5A3KFT3 312 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 ANXA2P2A6NMY6 339 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 STX11O75558 287 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 LEFTY1O75610 366 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 MRPL3P09001 348 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 IFNGR1P15260 489 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 RAB3AP20336 220 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 CALCRP30988 508 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 S100A11P31949 105 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 RECQLP46063 649 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 TAS2R38P59533 333 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 PSMA6P60900 246 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 ELFN2Q5R3F8 820 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 C17orf64Q86WR6 236 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 LSRQ86X29 649 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 OR6V1Q8N148 313 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 MEIOBQ8N635 442 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 TTLQ8NG68 377 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 WDR89Q96FK6 387 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC38A1Q9H2H9 487 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 MTIF3Q9H2K0 278 aaKnown RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 POLMQ9NP87 494 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 TAC3Q9UHF0 121 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 COL4A3Q01955 1670 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 WASH3PC4AMC7 463 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 FLRT2O43155 660 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 NDUFS4O43181 175 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 LILRB5O75023 590 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 ASGR2P07307 311 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 VIPR2P41587 438 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 NRG3P56975 720 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 RGS8P57771 180 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 OR12D2P58182 307 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 ERVK-21P61565 698 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF169Q14929 603 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 LY6G5CQ5SRR4 150 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 PRAMEF8Q5VWM4 474 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 PRAMEF7Q5VXH5 474 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 DMKNQ6E0U4 476 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 ATRAIDQ6UW56 229 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 KAT2AQ92830 837 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 GCDHQ92947 438 aaPredicted RBP17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC41A3Q96GZ6 507 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 AIF1LQ9BQI0 150 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 DPH7Q9BTV6 452 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 PBX4Q9BYU1 374 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 FN3KQ9H479 309 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 EPHX3Q9H6B9 360 aa17.93■□□□□ 0.46
SNAPC3-206ENST00000490969 OR2A4O95047 310 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 MAZP56270 477 aaKnown RBP17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 MESP2Q0VG99 397 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF77Q15935 545 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 CLVS2Q5SYC1 327 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 TMEM215Q68D42 235 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 DGLUCYQ7Z3D6 616 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 UBE3DQ7Z6J8 389 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF671Q8TAW3 534 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 LGALS14Q8TCE9 139 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 OR2A7Q96R45 310 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 BBS4Q96RK4 519 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 MCHR1Q99705 422 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 OR2AG1Q9H205 316 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 OR52D1Q9H346 318 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 ZCCHC4Q9H5U6 513 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms