RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RIBC2Q9H4K1 309 aa19.03■□□□□ 0.64
SND1-214ENST00000489417 ANKRD10Q9NXR5 420 aa19.03■□□□□ 0.64
SND1-214ENST00000489417 CNIH4Q9P003 139 aa19.03■□□□□ 0.64
SND1-214ENST00000489417 LRCH1Q9Y2L9 728 aa19.03■□□□□ 0.64
SND1-214ENST00000489417 H0YAE9 185 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 DENRO43583 198 aaKnown RBP19.02■□□□□ 0.64
SND1-214ENST00000489417 PIP5K1CO60331 668 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 GP1BBP13224 206 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 MST1P26927 711 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 RBM34P42696 430 aaKnown RBP19.02■□□□□ 0.64
SND1-214ENST00000489417 SLC1A3P43003 542 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 CYB561P49447 251 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 ADARB1P78563 741 aaKnown RBP19.02■□□□□ 0.64
SND1-214ENST00000489417 QPRTQ15274 297 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 SLC36A3Q495N2 470 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 OR5M10Q6IEU7 315 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 LINC00114Q6XXX2 140 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 PRICKLE2Q7Z3G6 844 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 NRMQ8IXM6 262 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 SNIP1Q8TAD8 396 aaKnown RBP19.02■□□□□ 0.64
SND1-214ENST00000489417 GNPDA2Q8TDQ7 276 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 ZNF524Q96C55 264 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 ZNF426Q9BUY5 554 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 KRCC1Q9NPI7 259 aaPredicted RBP19.02■□□□□ 0.64
SND1-214ENST00000489417 TAS2R10Q9NYW0 307 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 MED11Q9P086 117 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 HRH3Q9Y5N1 445 aa19.02■□□□□ 0.64
SND1-214ENST00000489417 CFAP54Q96N23 3096 aa19.02■□□□□ 0.63
SND1-214ENST00000489417 KLK10O43240 276 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 PNMTP11086 282 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 PTNP21246 168 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 CASRP41180 1078 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 OC90Q02509 493 aaPredicted RBP19.01■□□□□ 0.63
SND1-214ENST00000489417 TOMM34Q15785 309 aaPredicted RBP19.01■□□□□ 0.63
SND1-214ENST00000489417 KLHL17Q6TDP4 642 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 ATG4DQ86TL0 474 aaPredicted RBP19.01■□□□□ 0.63
SND1-214ENST00000489417 PARP8Q8N3A8 854 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 ZNF555Q8NEP9 628 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 NTNG2Q96CW9 530 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 FRMD6Q96NE9 622 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 GABARAPL3Q9BY60 117 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 DPH1Q9BZG8 443 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 ING2Q9H160 280 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 C12orf10Q9HB07 376 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 FAM118AQ9NWS6 357 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 MED31Q9Y3C7 131 aa19.01■□□□□ 0.63
SND1-214ENST00000489417 A0A087WUJ7 227 aa19■□□□□ 0.63
SND1-214ENST00000489417 ANKRD33BA6NCL7 494 aa19■□□□□ 0.63
SND1-214ENST00000489417 ELOA3DA6NLF2 546 aaPredicted RBP19■□□□□ 0.63
SND1-214ENST00000489417 B4DXG7 233 aa19■□□□□ 0.63
SND1-214ENST00000489417 P04436 131 aa19■□□□□ 0.63
SND1-214ENST00000489417 OMPP47874 163 aa19■□□□□ 0.63
SND1-214ENST00000489417 MED21Q13503 144 aa19■□□□□ 0.63
SND1-214ENST00000489417 ELOA3BQ3SY89 546 aa19■□□□□ 0.63
SND1-214ENST00000489417 TTC23Q5W5X9 447 aa19■□□□□ 0.63
SND1-214ENST00000489417 TTC33Q6PID6 262 aaPredicted RBP19■□□□□ 0.63
SND1-214ENST00000489417 CD300LDQ6UXZ3 194 aa19■□□□□ 0.63
SND1-214ENST00000489417 MDGA2Q7Z553 956 aa19■□□□□ 0.63
SND1-214ENST00000489417 CHERPQ8IWX8 916 aaKnown RBP19■□□□□ 0.63
SND1-214ENST00000489417 ELOA3Q8NG57 546 aa19■□□□□ 0.63
SND1-214ENST00000489417 OR2M3Q8NG83 312 aa19■□□□□ 0.63
SND1-214ENST00000489417 UTP23Q9BRU9 249 aaKnown RBP19■□□□□ 0.63
SND1-214ENST00000489417 ADAM19Q9H013 955 aa19■□□□□ 0.63
SND1-214ENST00000489417 DSN1Q9H410 356 aa19■□□□□ 0.63
SND1-214ENST00000489417 PROK2Q9HC23 129 aa19■□□□□ 0.63
SND1-214ENST00000489417 GPR83Q9NYM4 423 aa19■□□□□ 0.63
SND1-214ENST00000489417 ENOPH1Q9UHY7 261 aa19■□□□□ 0.63
SND1-214ENST00000489417 A6NL46 340 aa19■□□□□ 0.63
SND1-214ENST00000489417 GNB5O14775 395 aa19■□□□□ 0.63
SND1-214ENST00000489417 CDC40O60508 579 aaKnown RBP eCLIP19■□□□□ 0.63
SND1-214ENST00000489417 TACR3P29371 465 aa19■□□□□ 0.63
SND1-214ENST00000489417 POLR2IP36954 125 aaKnown RBP19■□□□□ 0.63
SND1-214ENST00000489417 CD96P40200 585 aa19■□□□□ 0.63
SND1-214ENST00000489417 GSSP48637 474 aa19■□□□□ 0.63
SND1-214ENST00000489417 PRKCDQ05655 676 aa19■□□□□ 0.63
SND1-214ENST00000489417 COX10Q12887 443 aa19■□□□□ 0.63
SND1-214ENST00000489417 NPRL3Q12980 569 aa19■□□□□ 0.63
SND1-214ENST00000489417 TUBA3CQ13748 450 aa19■□□□□ 0.63
SND1-214ENST00000489417 TUBA3EQ6PEY2 450 aa19■□□□□ 0.63
SND1-214ENST00000489417 LINC00696Q6ZRV3 163 aa19■□□□□ 0.63
SND1-214ENST00000489417 MEX3DQ86XN8 651 aaKnown RBP19■□□□□ 0.63
SND1-214ENST00000489417 FADS6Q8N9I5 356 aa19■□□□□ 0.63
SND1-214ENST00000489417 OR4K17Q8NGC6 315 aa19■□□□□ 0.63
SND1-214ENST00000489417 PFN4Q8NHR9 129 aa19■□□□□ 0.63
SND1-214ENST00000489417 TMEM234Q8WY98 164 aa19■□□□□ 0.63
SND1-214ENST00000489417 FAM46AQ96IP4 442 aaKnown RBP19■□□□□ 0.63
SND1-214ENST00000489417 ZNF570Q96NI8 536 aa19■□□□□ 0.63
SND1-214ENST00000489417 GPA33Q99795 319 aa19■□□□□ 0.63
SND1-214ENST00000489417 ANKRD60Q9BZ19 345 aa19■□□□□ 0.63
SND1-214ENST00000489417 SACM1LQ9NTJ5 587 aa19■□□□□ 0.63
SND1-214ENST00000489417 TMEM5Q9Y2B1 443 aa19■□□□□ 0.63
SND1-214ENST00000489417 KPNA4O00629 521 aaPredicted RBP18.99■□□□□ 0.63
SND1-214ENST00000489417 CDK2AP1O14519 115 aa18.99■□□□□ 0.63
SND1-214ENST00000489417 SLC16A6O15403 523 aa18.99■□□□□ 0.63
SND1-214ENST00000489417 IFI30P13284 250 aa18.99■□□□□ 0.63
SND1-214ENST00000489417 GSTM3P21266 225 aa18.99■□□□□ 0.63
SND1-214ENST00000489417 FPR3P25089 353 aa18.99■□□□□ 0.63
SND1-214ENST00000489417 ALDH6A1Q02252 535 aaKnown RBP18.99■□□□□ 0.63
SND1-214ENST00000489417 TSPAN31Q12999 210 aa18.99■□□□□ 0.63
SND1-214ENST00000489417 RAPSNQ13702 412 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms