RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 ZCCHC23Q6ZST2 131 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 KRTCAP2Q8N6L1 136 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 NATD1Q8N6N6 113 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 FNDC5Q8NAU1 212 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 ZNF75CPQ92670 426 aaPredicted RBP10.97□□□□□ -0.65
CPSF3-204ENST00000489403 ZNF775Q96BV0 537 aaPredicted RBP10.97□□□□□ -0.65
CPSF3-204ENST00000489403 COQ8BQ96D53 544 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 OR5B2Q96R09 309 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 SDF2Q99470 211 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 TRAF4Q9BUZ4 470 aaPredicted RBP10.97□□□□□ -0.65
CPSF3-204ENST00000489403 SERHL2Q9H4I8 314 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 L2HGDHQ9H9P8 463 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 NPAP1Q9NZP6 1156 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 SLC17A7Q9P2U7 560 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 GDF2Q9UK05 429 aaPredicted RBP10.97□□□□□ -0.65
CPSF3-204ENST00000489403 RTTNQ86VV8 2226 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 SERINC4A6NH21 518 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 CD5LO43866 347 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 DNAJA2O60884 412 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 SKAP2O75563 359 aaPredicted RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 LYPLA1O75608 230 aaPredicted RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 SLU7O95391 586 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 ARRB2P32121 409 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 SOAT1P35610 550 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 C21orf58P58505 322 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 RPS26P62854 115 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 HBA1P69905 142 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 SKP2Q13309 424 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 PPA1Q15181 289 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 TIGD2Q4W5G0 525 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 C6orf136Q5SQH8 315 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 IL23RQ5VWK5 629 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 OLIG3Q7RTU3 272 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 DTX2Q86UW9 622 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 RIMKLAQ8IXN7 391 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 EIF1ADQ8N9N8 165 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 MOAP1Q96BY2 351 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 THUMPD3Q9BV44 507 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 GRIP2Q9C0E4 1043 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 BHLHE41Q9C0J9 482 aaPredicted RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 NMUR2Q9GZQ4 415 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 QRSL1Q9H0R6 528 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 ALG2Q9H553 416 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 EML4Q9HC35 981 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.65
CPSF3-204ENST00000489403 KCNE5Q9UJ90 142 aa10.96□□□□□ -0.65
CPSF3-204ENST00000489403 CADP27708 2225 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF724A8MTY0 619 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 ABCD4O14678 606 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 CFLARO15519 480 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 FCMRO60667 390 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 UGT2B17O75795 530 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 CYP7B1O75881 506 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 TP53P04637 393 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-204ENST00000489403 FESP07332 822 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 MATN1P21941 496 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 DIO1P49895 249 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 CDH11P55287 796 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 GPR68Q15743 365 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF141Q15928 474 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 TIMM23BQ5SRD1 257 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 ABLIM2Q6H8Q1 611 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 OR2W6PQ8NHA6 318 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 HS6ST2Q96MM7 605 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 PRPF18Q99633 342 aaKnown RBP10.95□□□□□ -0.66
CPSF3-204ENST00000489403 DUSP26Q9BV47 211 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 LAT2Q9GZY6 243 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 ZDHHC2Q9UIJ5 367 aa10.95□□□□□ -0.66
CPSF3-204ENST00000489403 FBN3Q75N90 2809 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 GOLGA8QA0A0J9YX86 632 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 TLDC2A0PJX2 215 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 GOLGA8OA6NCC3 632 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 OR5H1A6NKK0 313 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 GOLGA8NF8WBI6 632 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 TLX2O43763 284 aaPredicted RBP10.94□□□□□ -0.66
CPSF3-204ENST00000489403 STX11O75558 287 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 PGM3O95394 542 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 AK1P00568 194 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 CSTAP01040 98 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 UBTFL6P0CB48 400 aaPredicted RBP10.94□□□□□ -0.66
CPSF3-204ENST00000489403 G6PDP11413 515 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 GGT1P19440 569 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 PRPS1L1P21108 318 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 PTNP21246 168 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 SESN3P58005 492 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 MERTKQ12866 999 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 ARHGAP11BQ3KRB8 267 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 SYT14P1Q58G82 188 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 HMBOX1Q6NT76 420 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 BHLHB9Q6PI77 547 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 TMPPEQ6ZT21 453 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 GALNT5Q7Z7M9 940 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 CLECL1Q8IZS7 167 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 CLEC4FQ8N1N0 589 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 ZNF433Q8N7K0 673 aaPredicted RBP10.94□□□□□ -0.66
CPSF3-204ENST00000489403 ST8SIA1Q92185 356 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 ARL8AQ96BM9 186 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 TUBGCP3Q96CW5 907 aa10.94□□□□□ -0.66
CPSF3-204ENST00000489403 MUCL1Q96DR8 90 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms